| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311596
Identifier: 18311596
GI number: 18311596
Start: 2991273
End: 2991857
Strand: Reverse
Name: 18311596
Synonym: CPE2614
Alternate gene names: NA
Gene position: 2991857-2991273 (Counterclockwise)
Preceding gene: 18311598
Following gene: 18311593
Centisome position: 98.69
GC content: 24.96
Gene sequence:
>585_bases ATGAAATTTAGGATTACCAATGAAAATATAGAGGGGTATAATACAGAATTAAAGATTAGAAGAATGAATTATGATCAAGT AGTGGTAAATTATCAAAATAATTCTGGAATAAAAACATTTAAAATGAATGAGGGAGAATTAGTTTCAGAAGGAGAAGTTG ATGATATAATTAAAAAATACAATGATTTATTAAAAATAAAAATAAATAGAGGAACATCAGCTTTGTTTTATAAAGGTATA ATAGATTCAATTGAAGAATCTATTGAGGAAGTAAAATCCTTAAAAGTTTTAAATGATTTTACTAAATCAACAAGTAAAAG AGGAATTTGGGATAAAGAGATACTTATATACCTAAACGAGAGCTATCCAATAAAAATTGAAGCAAGTGGAAGAAATTTTA GGGAAGATAGTTATAAGTTCAATATTAAGGTTATAGAAGAAGCAGAATTCATTGAAATGTGCCATTTTAATATAGGAAAA TTAAAGAATCAAATAGGTTGGAGAGAAAGGCAGTTAAATGTCTATAAAAAAATAGTTGAAAAAATAGAAAAAGAGAGTAA TTTTGAGCAAAATGGCGAATTATAA
Upstream 100 bases:
>100_bases ATTGTATCACATTTGACTAGTAATAGATACTTAAAGAGAAGAAATTATAAAGTTATATTATTTTCTTTAAGGAGTAATAC TAAATAGTGAGGTGAATATT
Downstream 100 bases:
>100_bases TTATAATTTTGTTAAATAGCTATAAATAGCCTAAAATAACTAAAAAAAGTGTTGACATAACTTTAGTTTTTGGGTATTAT ATTCCTTGTCAGGTCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKYNDLLKIKINRGTSALFYKGI IDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNESYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGK LKNQIGWRERQLNVYKKIVEKIEKESNFEQNGEL
Sequences:
>Translated_194_residues MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKYNDLLKIKINRGTSALFYKGI IDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNESYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGK LKNQIGWRERQLNVYKKIVEKIEKESNFEQNGEL >Mature_194_residues MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKYNDLLKIKINRGTSALFYKGI IDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNESYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGK LKNQIGWRERQLNVYKKIVEKIEKESNFEQNGEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22914; Mature: 22914
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKY CEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCEECCCCHHHHHHHH NDLLKIKINRGTSALFYKGIIDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNE CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC SYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGKLKNQIGWRERQLNVYKKIVE CCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH KIEKESNFEQNGEL HHHHHCCCCCCCCC >Mature Secondary Structure MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKY CEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCEECCCCHHHHHHHH NDLLKIKINRGTSALFYKGIIDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNE CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC SYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGKLKNQIGWRERQLNVYKKIVE CCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH KIEKESNFEQNGEL HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA