Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18311596

Identifier: 18311596

GI number: 18311596

Start: 2991273

End: 2991857

Strand: Reverse

Name: 18311596

Synonym: CPE2614

Alternate gene names: NA

Gene position: 2991857-2991273 (Counterclockwise)

Preceding gene: 18311598

Following gene: 18311593

Centisome position: 98.69

GC content: 24.96

Gene sequence:

>585_bases
ATGAAATTTAGGATTACCAATGAAAATATAGAGGGGTATAATACAGAATTAAAGATTAGAAGAATGAATTATGATCAAGT
AGTGGTAAATTATCAAAATAATTCTGGAATAAAAACATTTAAAATGAATGAGGGAGAATTAGTTTCAGAAGGAGAAGTTG
ATGATATAATTAAAAAATACAATGATTTATTAAAAATAAAAATAAATAGAGGAACATCAGCTTTGTTTTATAAAGGTATA
ATAGATTCAATTGAAGAATCTATTGAGGAAGTAAAATCCTTAAAAGTTTTAAATGATTTTACTAAATCAACAAGTAAAAG
AGGAATTTGGGATAAAGAGATACTTATATACCTAAACGAGAGCTATCCAATAAAAATTGAAGCAAGTGGAAGAAATTTTA
GGGAAGATAGTTATAAGTTCAATATTAAGGTTATAGAAGAAGCAGAATTCATTGAAATGTGCCATTTTAATATAGGAAAA
TTAAAGAATCAAATAGGTTGGAGAGAAAGGCAGTTAAATGTCTATAAAAAAATAGTTGAAAAAATAGAAAAAGAGAGTAA
TTTTGAGCAAAATGGCGAATTATAA

Upstream 100 bases:

>100_bases
ATTGTATCACATTTGACTAGTAATAGATACTTAAAGAGAAGAAATTATAAAGTTATATTATTTTCTTTAAGGAGTAATAC
TAAATAGTGAGGTGAATATT

Downstream 100 bases:

>100_bases
TTATAATTTTGTTAAATAGCTATAAATAGCCTAAAATAACTAAAAAAAGTGTTGACATAACTTTAGTTTTTGGGTATTAT
ATTCCTTGTCAGGTCGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKYNDLLKIKINRGTSALFYKGI
IDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNESYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGK
LKNQIGWRERQLNVYKKIVEKIEKESNFEQNGEL

Sequences:

>Translated_194_residues
MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKYNDLLKIKINRGTSALFYKGI
IDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNESYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGK
LKNQIGWRERQLNVYKKIVEKIEKESNFEQNGEL
>Mature_194_residues
MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKYNDLLKIKINRGTSALFYKGI
IDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNESYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGK
LKNQIGWRERQLNVYKKIVEKIEKESNFEQNGEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22914; Mature: 22914

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKY
CEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCEECCCCHHHHHHHH
NDLLKIKINRGTSALFYKGIIDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNE
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
SYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGKLKNQIGWRERQLNVYKKIVE
CCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH
KIEKESNFEQNGEL
HHHHHCCCCCCCCC
>Mature Secondary Structure
MKFRITNENIEGYNTELKIRRMNYDQVVVNYQNNSGIKTFKMNEGELVSEGEVDDIIKKY
CEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCEECCCCHHHHHHHH
NDLLKIKINRGTSALFYKGIIDSIEESIEEVKSLKVLNDFTKSTSKRGIWDKEILIYLNE
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
SYPIKIEASGRNFREDSYKFNIKVIEEAEFIEMCHFNIGKLKNQIGWRERQLNVYKKIVE
CCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH
KIEKESNFEQNGEL
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA