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The map label for this gene is yebA [H]

Identifier: 18311593

GI number: 18311593

Start: 2986894

End: 2987946

Strand: Reverse

Name: yebA [H]

Synonym: CPE2611

Alternate gene names: 18311593

Gene position: 2987946-2986894 (Counterclockwise)

Preceding gene: 18311596

Following gene: 18311588

Centisome position: 98.57

GC content: 31.15

Gene sequence:

>1053_bases
ATGAGTATTTCAGAGGGTGAGGGGAGAAACTTTATTAAAGTTTTTCTAATTACCTTAATTATTTTATTTTGTACAGTTAA
AACTAATGTTTTTGCTAATTCTTTATACCCAAGAATGGGAAGTGAAAAACTTATTTTTGTAAATATGCCTTGTATGGCTA
ATGTTTATGTGGAGGCTTATGAATTATCTCTAAATAACAAGGTTATAGGGTATATAGGAAATCCTGATACAGTTGAAACT
GTTTTAAATAAAATAAAACAAACATACATAGATAAGGCTTCTGAAAAGGGAGTTTTAGTTAAAGAAGTAAATTTTGATAC
AAAAATAGATTTAAAAAAGAATATGATTCAATCTAAAGATTTAAGTTCAGTAGAGGATATAACTTCAAAGATAATGCTTG
CTAATGATATTTTAGAGGAACCTTTGCTAGATGTAACTATTGAAGCTGAAATTGATGAAATTGCATCAATAGAGCCAGCA
GTTGAAGTTATAAAACTAGAAGACAAGTATTTAGGAGAAAATACTATTGAAGAAGGAAAATGGGGAGAGAAAAAGGTTAA
AAAGAAAGTAACATTTGTAAATGGAAAAGAATCAGAAAGTGAAATAATATCTGAATCAGTTTTGAAAGAAGCTGAGAGTA
CAAAAATATATAAGGGAATAAAAAATCCAATTAACTCTAATATGGCATTTTTAGCTCATCCAACTAGAGGTGGAGTTATA
ACATCTGTCTTTGGAGAAAAGAGTAGAGGAGGCCATAGAGGAGTTGATATAGCGGTTCCTAGTGGAACACCAATAGGAGC
AGCTTGTGATGGTGTAGTAAGTTTTGTTGGGTATGACGATATATATGGCAATATGGTTAAAATAAAGCACGATGATAATA
CAGAAACTCTCTACGCTCATGCTAGTTATATATTAACTGAGCTTGGAAAAGAAGTGAAAAAAGGTGAGACTATTGCCAAA
GTTGGTAGTACTGGAAGAAGTACGGGGCCTCACCTGCATTTAGAACTTATATATAAGGGTAATCCTATTAATCCTGTAGA
TTATATTAGTTAG

Upstream 100 bases:

>100_bases
AAAATATTTTATTTACATGAATAATTTTTTGTTAAGTGGAAACATTAATTTACGTGTTTAAATTTATACTAAAATTTTTA
TTAAAAGGAGAATTACCAAT

Downstream 100 bases:

>100_bases
TTTTAAATATTTTCAAGTAAAAAAGATAAATCTATGACTCCTTCTCCAACAGAATCAGAAGGTAGTTCATATTTATTATT
AGAAGCTATTTTTAATAAAG

Product: peptidase, M23/M37 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSISEGEGRNFIKVFLITLIILFCTVKTNVFANSLYPRMGSEKLIFVNMPCMANVYVEAYELSLNNKVIGYIGNPDTVET
VLNKIKQTYIDKASEKGVLVKEVNFDTKIDLKKNMIQSKDLSSVEDITSKIMLANDILEEPLLDVTIEAEIDEIASIEPA
VEVIKLEDKYLGENTIEEGKWGEKKVKKKVTFVNGKESESEIISESVLKEAESTKIYKGIKNPINSNMAFLAHPTRGGVI
TSVFGEKSRGGHRGVDIAVPSGTPIGAACDGVVSFVGYDDIYGNMVKIKHDDNTETLYAHASYILTELGKEVKKGETIAK
VGSTGRSTGPHLHLELIYKGNPINPVDYIS

Sequences:

>Translated_350_residues
MSISEGEGRNFIKVFLITLIILFCTVKTNVFANSLYPRMGSEKLIFVNMPCMANVYVEAYELSLNNKVIGYIGNPDTVET
VLNKIKQTYIDKASEKGVLVKEVNFDTKIDLKKNMIQSKDLSSVEDITSKIMLANDILEEPLLDVTIEAEIDEIASIEPA
VEVIKLEDKYLGENTIEEGKWGEKKVKKKVTFVNGKESESEIISESVLKEAESTKIYKGIKNPINSNMAFLAHPTRGGVI
TSVFGEKSRGGHRGVDIAVPSGTPIGAACDGVVSFVGYDDIYGNMVKIKHDDNTETLYAHASYILTELGKEVKKGETIAK
VGSTGRSTGPHLHLELIYKGNPINPVDYIS
>Mature_349_residues
SISEGEGRNFIKVFLITLIILFCTVKTNVFANSLYPRMGSEKLIFVNMPCMANVYVEAYELSLNNKVIGYIGNPDTVETV
LNKIKQTYIDKASEKGVLVKEVNFDTKIDLKKNMIQSKDLSSVEDITSKIMLANDILEEPLLDVTIEAEIDEIASIEPAV
EVIKLEDKYLGENTIEEGKWGEKKVKKKVTFVNGKESESEIISESVLKEAESTKIYKGIKNPINSNMAFLAHPTRGGVIT
SVFGEKSRGGHRGVDIAVPSGTPIGAACDGVVSFVGYDDIYGNMVKIKHDDNTETLYAHASYILTELGKEVKKGETIAKV
GSTGRSTGPHLHLELIYKGNPINPVDYIS

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=171, Percent_Identity=33.9181286549708, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789099, Length=117, Percent_Identity=44.4444444444444, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87082174, Length=117, Percent_Identity=40.1709401709402, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082297, Length=169, Percent_Identity=28.4023668639053, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38520; Mature: 38388

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISEGEGRNFIKVFLITLIILFCTVKTNVFANSLYPRMGSEKLIFVNMPCMANVYVEAY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEE
ELSLNNKVIGYIGNPDTVETVLNKIKQTYIDKASEKGVLVKEVNFDTKIDLKKNMIQSKD
EEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECHHHHHHHHCC
LSSVEDITSKIMLANDILEEPLLDVTIEAEIDEIASIEPAVEVIKLEDKYLGENTIEEGK
CHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCHHHEEEECHHHCCCCCCCCCC
WGEKKVKKKVTFVNGKESESEIISESVLKEAESTKIYKGIKNPINSNMAFLAHPTRGGVI
CCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEE
TSVFGEKSRGGHRGVDIAVPSGTPIGAACDGVVSFVGYDDIYGNMVKIKHDDNTETLYAH
EEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHCCCEEEEEECCCCCEEHHH
ASYILTELGKEVKKGETIAKVGSTGRSTGPHLHLELIYKGNPINPVDYIS
HHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SISEGEGRNFIKVFLITLIILFCTVKTNVFANSLYPRMGSEKLIFVNMPCMANVYVEAY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEE
ELSLNNKVIGYIGNPDTVETVLNKIKQTYIDKASEKGVLVKEVNFDTKIDLKKNMIQSKD
EEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECHHHHHHHHCC
LSSVEDITSKIMLANDILEEPLLDVTIEAEIDEIASIEPAVEVIKLEDKYLGENTIEEGK
CHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCHHHEEEECHHHCCCCCCCCCC
WGEKKVKKKVTFVNGKESESEIISESVLKEAESTKIYKGIKNPINSNMAFLAHPTRGGVI
CCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEE
TSVFGEKSRGGHRGVDIAVPSGTPIGAACDGVVSFVGYDDIYGNMVKIKHDDNTETLYAH
EEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHCCCEEEEEECCCCCEEHHH
ASYILTELGKEVKKGETIAKVGSTGRSTGPHLHLELIYKGNPINPVDYIS
HHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]