Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is aprX [H]

Identifier: 18311592

GI number: 18311592

Start: 2985695

End: 2986891

Strand: Direct

Name: aprX [H]

Synonym: CPE2610

Alternate gene names: 18311592

Gene position: 2985695-2986891 (Clockwise)

Preceding gene: 18311591

Following gene: 18311594

Centisome position: 98.49

GC content: 29.41

Gene sequence:

>1197_bases
ATGTTTTCAATAAAACAAAAATTGGATAGCAATCTAAAAATTTATATAAATCGCTCTTATTATACAAATTATAGAGTTCT
TATAAAATGCAAAAAATTTATGGAAGATATAACAAAGAAAATACCCAAGCTTAGAGGTATTGTTATAAGAGAAATTAAGT
CATTAAATTTGATTTGCGCTATTCTTACACCAAAAGCTATTAATAGATTAATTGAATATCCTGAGGTAGAATTTATTTCT
TTTGATGATCATGCTATACTTTGTGGGCTTAGTATAGGTACTGCTAATAGAATTGCCACCAATAAATCCTTTAATTTTAC
TGGCAAGAATATATCTATTGGTTTAATTGATAGTGGAGTCTATCCTCATCAAGATCTAACAAATCCTACAAACAAAATAG
ATATGTTTTTGGATTTATTAAATAACTACTCTTATCCTTATGATGATAATGGACATGGAACTGCCTTAAGTGGGATTATA
TGTGGAAGTGGATATTCATCAAAGCTTGTTTTTAGAGGTATTGCAGAAAACACCAAAATATCTTGTGTAAAGGCCTTTGA
TGCTAATGGAAAGGGCTATGTTTCAGATATACTTTTCGCCATTGAAACTCTTATAAATCAAGAGAATAATCCTATAAGAG
TTTTATGTTTACCTTTTGAACTTACTAGCCATAATATTAAAATATCAGATTACTTTAACGAACTTTTTAAGTTAGCAGTT
AGTAAAAATATAATTCCTGTTGTCCCTTCTGGAAGCATAGAAGGAGATAACACTATTCAGGGTTTAGCATTATCTCCTTG
GTGTATAACAGTTGGTGGTATAGATTCTACAAAGACACCAACAACAACTTTTAAATTTTCTTCATCTGGAAATTCTAATG
TGAAAAAACCAGATTTTTGTGCAGCCTGTGCTAATATAATGTGCTTAAACTCAGATAAAAAATATATTTCTGAAAGAAAT
GGAATAAAACTATATCCTCATAAATTAGATAGTAGTTACACAGTCTTTCAAGGAACATCCCTAGCCTGTGCCTACATATC
TGGAGTATGTGCACTACTTTTAGAGGCCAAGCCAGAACTAAATTACAAAGATTTATGTTCTTTATTAAAAATAGCTTCTA
ATAATAAATATGAACTACCTTCTGATTCTGTTGGAGAAGGAGTCATAGATTTATCTTTTTTACTTGAAAATATTTAA

Upstream 100 bases:

>100_bases
AGTTGGAATTATCATTTTTAAATGGAAAAGTTAATACATTGTCAAAATCATACTCCCATTCATATATTATAAAATAATAA
ATAATATGGGAGTATTTATT

Downstream 100 bases:

>100_bases
AACTAACTAATATAATCTACAGGATTAATAGGATTACCCTTATATATAAGTTCTAAATGCAGGTGAGGCCCCGTACTTCT
TCCAGTACTACCAACTTTGG

Product: subtilase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MFSIKQKLDSNLKIYINRSYYTNYRVLIKCKKFMEDITKKIPKLRGIVIREIKSLNLICAILTPKAINRLIEYPEVEFIS
FDDHAILCGLSIGTANRIATNKSFNFTGKNISIGLIDSGVYPHQDLTNPTNKIDMFLDLLNNYSYPYDDNGHGTALSGII
CGSGYSSKLVFRGIAENTKISCVKAFDANGKGYVSDILFAIETLINQENNPIRVLCLPFELTSHNIKISDYFNELFKLAV
SKNIIPVVPSGSIEGDNTIQGLALSPWCITVGGIDSTKTPTTTFKFSSSGNSNVKKPDFCAACANIMCLNSDKKYISERN
GIKLYPHKLDSSYTVFQGTSLACAYISGVCALLLEAKPELNYKDLCSLLKIASNNKYELPSDSVGEGVIDLSFLLENI

Sequences:

>Translated_398_residues
MFSIKQKLDSNLKIYINRSYYTNYRVLIKCKKFMEDITKKIPKLRGIVIREIKSLNLICAILTPKAINRLIEYPEVEFIS
FDDHAILCGLSIGTANRIATNKSFNFTGKNISIGLIDSGVYPHQDLTNPTNKIDMFLDLLNNYSYPYDDNGHGTALSGII
CGSGYSSKLVFRGIAENTKISCVKAFDANGKGYVSDILFAIETLINQENNPIRVLCLPFELTSHNIKISDYFNELFKLAV
SKNIIPVVPSGSIEGDNTIQGLALSPWCITVGGIDSTKTPTTTFKFSSSGNSNVKKPDFCAACANIMCLNSDKKYISERN
GIKLYPHKLDSSYTVFQGTSLACAYISGVCALLLEAKPELNYKDLCSLLKIASNNKYELPSDSVGEGVIDLSFLLENI
>Mature_398_residues
MFSIKQKLDSNLKIYINRSYYTNYRVLIKCKKFMEDITKKIPKLRGIVIREIKSLNLICAILTPKAINRLIEYPEVEFIS
FDDHAILCGLSIGTANRIATNKSFNFTGKNISIGLIDSGVYPHQDLTNPTNKIDMFLDLLNNYSYPYDDNGHGTALSGII
CGSGYSSKLVFRGIAENTKISCVKAFDANGKGYVSDILFAIETLINQENNPIRVLCLPFELTSHNIKISDYFNELFKLAV
SKNIIPVVPSGSIEGDNTIQGLALSPWCITVGGIDSTKTPTTTFKFSSSGNSNVKKPDFCAACANIMCLNSDKKYISERN
GIKLYPHKLDSSYTVFQGTSLACAYISGVCALLLEAKPELNYKDLCSLLKIASNNKYELPSDSVGEGVIDLSFLLENI

Specific function: Displays serine protease activity. Seems to have a broad substrate specificity [H]

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasm (Probable). Note=Is leaked to the culture medium during the late stationary phase owing to cell lysis [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500 [H]

Pfam domain/function: PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 44019; Mature: 44019

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSIKQKLDSNLKIYINRSYYTNYRVLIKCKKFMEDITKKIPKLRGIVIREIKSLNLICA
CCCCHHHCCCCEEEEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
ILTPKAINRLIEYPEVEFISFDDHAILCGLSIGTANRIATNKSFNFTGKNISIGLIDSGV
EECHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCCEECCCCCEECCCEEEEEEEECCC
YPHQDLTNPTNKIDMFLDLLNNYSYPYDDNGHGTALSGIICGSGYSSKLVFRGIAENTKI
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEE
SCVKAFDANGKGYVSDILFAIETLINQENNPIRVLCLPFELTSHNIKISDYFNELFKLAV
EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHHHHH
SKNIIPVVPSGSIEGDNTIQGLALSPWCITVGGIDSTKTPTTTFKFSSSGNSNVKKPDFC
CCCCEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHH
AACANIMCLNSDKKYISERNGIKLYPHKLDSSYTVFQGTSLACAYISGVCALLLEAKPEL
HHHHCEEEECCCHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
NYKDLCSLLKIASNNKYELPSDSVGEGVIDLSFLLENI
CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHCC
>Mature Secondary Structure
MFSIKQKLDSNLKIYINRSYYTNYRVLIKCKKFMEDITKKIPKLRGIVIREIKSLNLICA
CCCCHHHCCCCEEEEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
ILTPKAINRLIEYPEVEFISFDDHAILCGLSIGTANRIATNKSFNFTGKNISIGLIDSGV
EECHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCCEECCCCCEECCCEEEEEEEECCC
YPHQDLTNPTNKIDMFLDLLNNYSYPYDDNGHGTALSGIICGSGYSSKLVFRGIAENTKI
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEE
SCVKAFDANGKGYVSDILFAIETLINQENNPIRVLCLPFELTSHNIKISDYFNELFKLAV
EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHHHHH
SKNIIPVVPSGSIEGDNTIQGLALSPWCITVGGIDSTKTPTTTFKFSSSGNSNVKKPDFC
CCCCEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHH
AACANIMCLNSDKKYISERNGIKLYPHKLDSSYTVFQGTSLACAYISGVCALLLEAKPEL
HHHHCEEEECCCHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
NYKDLCSLLKIASNNKYELPSDSVGEGVIDLSFLLENI
CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]