Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311591

Identifier: 18311591

GI number: 18311591

Start: 2985197

End: 2985628

Strand: Direct

Name: 18311591

Synonym: CPE2609

Alternate gene names: NA

Gene position: 2985197-2985628 (Clockwise)

Preceding gene: 18311590

Following gene: 18311592

Centisome position: 98.47

GC content: 32.64

Gene sequence:

>432_bases
ATGCTTGGTATTATTTTAGCAATTATTTCTGGAGCAGCAATGAGTATACAAGGAGTTTTTAACACAAGAGTTTCAGAAAA
GATAGGTGTTTGGGAAACAAATACCATAGTTCAAGGGTCTGCTTTTGTTTTAGCACTGCTTATTATGCTTATGCTAAGAA
ACGGTAATTACTCTGAACTTCGTTCTGTAAACAAAATATATCTACTAGGAGGAGCAATTGGTGTTGTTATAACCTATACT
GTTATGGCTGCTGTAGGAAGCTTAGGACCAACCTTTGGTATATCAATAATCTTAATATCCCAACTCTTAACAGCAGGAAT
AATAGATGCTTTTGCCCTTTTTGATAGTGAAAAAATCAGATTTGCTGCCCACAATTATTTAGGAATAATATTAATGATAG
TTGGAATTATCATTTTTAAATGGAAAAGTTAA

Upstream 100 bases:

>100_bases
GAAGAAATTTTTTTCAAAAATGATTGTTGTAAGATAGCTCTCTAAAATTTAGAGAGTTATTTTTTTATTTGTGGAAATAC
TAAGCTTGAGGTGATTTATT

Downstream 100 bases:

>100_bases
TACATTGTCAAAATCATACTCCCATTCATATATTATAAAATAATAAATAATATGGGAGTATTTATTATGTTTTCAATAAA
ACAAAAATTGGATAGCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLGIILAIISGAAMSIQGVFNTRVSEKIGVWETNTIVQGSAFVLALLIMLMLRNGNYSELRSVNKIYLLGGAIGVVITYT
VMAAVGSLGPTFGISIILISQLLTAGIIDAFALFDSEKIRFAAHNYLGIILMIVGIIIFKWKS

Sequences:

>Translated_143_residues
MLGIILAIISGAAMSIQGVFNTRVSEKIGVWETNTIVQGSAFVLALLIMLMLRNGNYSELRSVNKIYLLGGAIGVVITYT
VMAAVGSLGPTFGISIILISQLLTAGIIDAFALFDSEKIRFAAHNYLGIILMIVGIIIFKWKS
>Mature_143_residues
MLGIILAIISGAAMSIQGVFNTRVSEKIGVWETNTIVQGSAFVLALLIMLMLRNGNYSELRSVNKIYLLGGAIGVVITYT
VMAAVGSLGPTFGISIILISQLLTAGIIDAFALFDSEKIRFAAHNYLGIILMIVGIIIFKWKS

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15352; Mature: 15352

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGIILAIISGAAMSIQGVFNTRVSEKIGVWETNTIVQGSAFVLALLIMLMLRNGNYSEL
CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCEECCHHHHHHHHHHHHHCCCCHHHH
RSVNKIYLLGGAIGVVITYTVMAAVGSLGPTFGISIILISQLLTAGIIDAFALFDSEKIR
HHCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
FAAHNYLGIILMIVGIIIFKWKS
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGIILAIISGAAMSIQGVFNTRVSEKIGVWETNTIVQGSAFVLALLIMLMLRNGNYSEL
CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCEECCHHHHHHHHHHHHHCCCCHHHH
RSVNKIYLLGGAIGVVITYTVMAAVGSLGPTFGISIILISQLLTAGIIDAFALFDSEKIR
HHCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
FAAHNYLGIILMIVGIIIFKWKS
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA