Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311589

Identifier: 18311589

GI number: 18311589

Start: 2983922

End: 2984467

Strand: Direct

Name: 18311589

Synonym: CPE2607

Alternate gene names: NA

Gene position: 2983922-2984467 (Clockwise)

Preceding gene: 18311580

Following gene: 18311590

Centisome position: 98.43

GC content: 27.11

Gene sequence:

>546_bases
ATGAAATATTATTTAGTAGCATTGTTTGATGAGGAGTCTTGTAAATCCCTTGAATCAATTCAAAGAGGTTTATTAAGAAA
ATACAAATTACCAAGAAATCATATAAGTTTACACATTCCTCTTGAAACAATTGATAACCCCAATCTAGATAAACTAGATG
AAGTGGTCCTTAAATTAATCAAACCTTATAAGAAATTTAAGATAGAGTTAACTGGTAGTGCTGAGTTTAATGAAAGTACT
AATAAAGCTCTAAACTTACAAATCGAAAACAAAGGTTATATTAAAAAAATTCATAGATTATTCAATGATATGTTAAAGTT
ACATGGTTTTAATGTTAGGGAGCGTGTTGACTCTCCTCTATACATACCTATAAACACCCCTAACTTTAAAGAAAATCATA
AAAAGAATAATACGCAACCTACTGTTTTTAACTTAAGAGAATCTTCTCAAAAGAACATATTAAAAATTTCTAAAATAGAA
CTTTGGAGATTTCAAAATAACAAAAGAGAAATCCCTGTAAAATCATACGATCTAAGAAATTACTAA

Upstream 100 bases:

>100_bases
ATTTCTCTCTTATTATTTTTTTTAAAAATTCTATATGTTATAATTTATAACAAAGTTTGTATTTATTTGGAACAAACTAA
TATTCAAGAGAGGTTTTGTT

Downstream 100 bases:

>100_bases
ATAATTTATATTGTGTCTATTTATATTAATATTTATATGACATATATTCAATTAACTTAGGTTAAAATAATTGTAAATTA
ACATTTCGTAACTTTTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKYYLVALFDEESCKSLESIQRGLLRKYKLPRNHISLHIPLETIDNPNLDKLDEVVLKLIKPYKKFKIELTGSAEFNEST
NKALNLQIENKGYIKKIHRLFNDMLKLHGFNVRERVDSPLYIPINTPNFKENHKKNNTQPTVFNLRESSQKNILKISKIE
LWRFQNNKREIPVKSYDLRNY

Sequences:

>Translated_181_residues
MKYYLVALFDEESCKSLESIQRGLLRKYKLPRNHISLHIPLETIDNPNLDKLDEVVLKLIKPYKKFKIELTGSAEFNEST
NKALNLQIENKGYIKKIHRLFNDMLKLHGFNVRERVDSPLYIPINTPNFKENHKKNNTQPTVFNLRESSQKNILKISKIE
LWRFQNNKREIPVKSYDLRNY
>Mature_181_residues
MKYYLVALFDEESCKSLESIQRGLLRKYKLPRNHISLHIPLETIDNPNLDKLDEVVLKLIKPYKKFKIELTGSAEFNEST
NKALNLQIENKGYIKKIHRLFNDMLKLHGFNVRERVDSPLYIPINTPNFKENHKKNNTQPTVFNLRESSQKNILKISKIE
LWRFQNNKREIPVKSYDLRNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21544; Mature: 21544

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYYLVALFDEESCKSLESIQRGLLRKYKLPRNHISLHIPLETIDNPNLDKLDEVVLKLI
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHEECCCCCHHHHHHHHHHHH
KPYKKFKIELTGSAEFNESTNKALNLQIENKGYIKKIHRLFNDMLKLHGFNVRERVDSPL
CCHHHEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCE
YIPINTPNFKENHKKNNTQPTVFNLRESSQKNILKISKIELWRFQNNKREIPVKSYDLRN
EEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCC
Y
C
>Mature Secondary Structure
MKYYLVALFDEESCKSLESIQRGLLRKYKLPRNHISLHIPLETIDNPNLDKLDEVVLKLI
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHEECCCCCHHHHHHHHHHHH
KPYKKFKIELTGSAEFNESTNKALNLQIENKGYIKKIHRLFNDMLKLHGFNVRERVDSPL
CCHHHEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCE
YIPINTPNFKENHKKNNTQPTVFNLRESSQKNILKISKIELWRFQNNKREIPVKSYDLRN
EEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA