| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is ykvI [H]
Identifier: 18311541
GI number: 18311541
Start: 2929650
End: 2930702
Strand: Direct
Name: ykvI [H]
Synonym: CPE2559
Alternate gene names: 18311541
Gene position: 2929650-2930702 (Clockwise)
Preceding gene: 18311530
Following gene: 18311551
Centisome position: 96.64
GC content: 27.64
Gene sequence:
>1053_bases ATGAAAAGTATTATAAAAGTTTTTCAAGTAGCTTTTGTTTTTATAGGAACTATAGTAGGAGCTGGACTTGCCTCTGGAAA GGAAATAACAAATTTCTTTACAGTGTATGGATATAAAAGCTTTTTTACTATTATAATGACTGGCTTATTTTATATTTTTC TTTGTAACATAATTTCAAGAATAAGTATTAAACATAGTTTAAATTCCTATAGCGAAGTCATAAATACAGTTAGCCCTAAT ATTTTAGGAAAACTCACTGGAATCATAACAACCTTTTACTTAATATCTAGTGCGTCAATAATACTAGCTGGTAGCGGAGC CTTGTTGAATCAATACTTTGGAATTCCTAAGATTATAGGTTCAATATTTATGGCTATTATTGCTTCGCTTATTCTTATGA GAGAAACTGATGGATTAGTAGAGATAAATTCTATCATTGTTCCATCCTTAATAATAGTAACAACTACGCTTATGATTCTT TATGTTATATTTGCTAATGACCCAATTACTATAGGTTCTCTTGTTTCTTCTACTCCAAAACTTTCTAAGGGAGTTTTTAC TTCTGGAATACTTTATTGTGGTTATAACATTCTTTGCTGCTGCGGGGTTATTGTTCCTTTAAGTAACGAAGTAAAAAGTA AAAAAATCATGACCTGGGGAATTATATTAGGTTCAGTTCTTCTAACAATAATATGTATTTTTATAAATTCAATGCTTATG GTTAATCAACCACAAATATTCCAATACGAAATTCCTCTACTTTATATTGCTGATAGATTTGGAAAGCCTATTCAAATAAT GCTTTTAATAATAATATTAGCTGAAATGTTTTCTACAGAGGTTTCTGATGTATATTCTATAAGTAAAACTCTTACTAAAA TCTTTAAAATAAAATATAAACATGCCATATTTGTAGTTTTAATAGTAGCACTTCCAATTTCATTAATAGGATTTTCAAAC TTAATATCCACATTATACCCAATGTTTGGAGTTTTAAGCTTAGTATTTATAGCTCAATGTATTTACTTCTACTTTTTTAA ATTAAAAAAATAA
Upstream 100 bases:
>100_bases TATTAATAAAATAATAAATATCCTAAACTTAATTTTTACTTTTTTATTTTAAGAATAAACTTCCTTTACAACTTATATAT TTAGTTAGGGAGGTGATTTA
Downstream 100 bases:
>100_bases AGATAAAAAGTAAAAGCTGAGCAAATTATATAACTTGCTCAGCTTTAATATTTAATAAATTATCTTTGGTACATTTTCAC GTCTATCCATTATTGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKSIIKVFQVAFVFIGTIVGAGLASGKEITNFFTVYGYKSFFTIIMTGLFYIFLCNIISRISIKHSLNSYSEVINTVSPN ILGKLTGIITTFYLISSASIILAGSGALLNQYFGIPKIIGSIFMAIIASLILMRETDGLVEINSIIVPSLIIVTTTLMIL YVIFANDPITIGSLVSSTPKLSKGVFTSGILYCGYNILCCCGVIVPLSNEVKSKKIMTWGIILGSVLLTIICIFINSMLM VNQPQIFQYEIPLLYIADRFGKPIQIMLLIIILAEMFSTEVSDVYSISKTLTKIFKIKYKHAIFVVLIVALPISLIGFSN LISTLYPMFGVLSLVFIAQCIYFYFFKLKK
Sequences:
>Translated_350_residues MKSIIKVFQVAFVFIGTIVGAGLASGKEITNFFTVYGYKSFFTIIMTGLFYIFLCNIISRISIKHSLNSYSEVINTVSPN ILGKLTGIITTFYLISSASIILAGSGALLNQYFGIPKIIGSIFMAIIASLILMRETDGLVEINSIIVPSLIIVTTTLMIL YVIFANDPITIGSLVSSTPKLSKGVFTSGILYCGYNILCCCGVIVPLSNEVKSKKIMTWGIILGSVLLTIICIFINSMLM VNQPQIFQYEIPLLYIADRFGKPIQIMLLIIILAEMFSTEVSDVYSISKTLTKIFKIKYKHAIFVVLIVALPISLIGFSN LISTLYPMFGVLSLVFIAQCIYFYFFKLKK >Mature_350_residues MKSIIKVFQVAFVFIGTIVGAGLASGKEITNFFTVYGYKSFFTIIMTGLFYIFLCNIISRISIKHSLNSYSEVINTVSPN ILGKLTGIITTFYLISSASIILAGSGALLNQYFGIPKIIGSIFMAIIASLILMRETDGLVEINSIIVPSLIIVTTTLMIL YVIFANDPITIGSLVSSTPKLSKGVFTSGILYCGYNILCCCGVIVPLSNEVKSKKIMTWGIILGSVLLTIICIFINSMLM VNQPQIFQYEIPLLYIADRFGKPIQIMLLIIILAEMFSTEVSDVYSISKTLTKIFKIKYKHAIFVVLIVALPISLIGFSN LISTLYPMFGVLSLVFIAQCIYFYFFKLKK
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38697; Mature: 38697
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIIKVFQVAFVFIGTIVGAGLASGKEITNFFTVYGYKSFFTIIMTGLFYIFLCNIISR CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISIKHSLNSYSEVINTVSPNILGKLTGIITTFYLISSASIILAGSGALLNQYFGIPKIIG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCHHHHHH SIFMAIIASLILMRETDGLVEINSIIVPSLIIVTTTLMILYVIFANDPITIGSLVSSTPK HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC LSKGVFTSGILYCGYNILCCCGVIVPLSNEVKSKKIMTWGIILGSVLLTIICIFINSMLM HHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNQPQIFQYEIPLLYIADRFGKPIQIMLLIIILAEMFSTEVSDVYSISKTLTKIFKIKYK CCCCCEEEEECCHHEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAIFVVLIVALPISLIGFSNLISTLYPMFGVLSLVFIAQCIYFYFFKLKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSIIKVFQVAFVFIGTIVGAGLASGKEITNFFTVYGYKSFFTIIMTGLFYIFLCNIISR CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISIKHSLNSYSEVINTVSPNILGKLTGIITTFYLISSASIILAGSGALLNQYFGIPKIIG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCHHHHHH SIFMAIIASLILMRETDGLVEINSIIVPSLIIVTTTLMILYVIFANDPITIGSLVSSTPK HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC LSKGVFTSGILYCGYNILCCCGVIVPLSNEVKSKKIMTWGIILGSVLLTIICIFINSMLM HHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNQPQIFQYEIPLLYIADRFGKPIQIMLLIIILAEMFSTEVSDVYSISKTLTKIFKIKYK CCCCCEEEEECCHHEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAIFVVLIVALPISLIGFSNLISTLYPMFGVLSLVFIAQCIYFYFFKLKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]