Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is comB [H]

Identifier: 18311538

GI number: 18311538

Start: 2926607

End: 2927350

Strand: Reverse

Name: comB [H]

Synonym: CPE2556

Alternate gene names: 18311538

Gene position: 2927350-2926607 (Counterclockwise)

Preceding gene: 18311539

Following gene: 18311537

Centisome position: 96.57

GC content: 28.23

Gene sequence:

>744_bases
ATGAAAATTGATGTTATAATTTCTGCAGATTATATAGATAGTGAATCACTTAAAGGAAAGATAGCTGTGGTTATAGATAT
GTTAAGAGCTACATCTGTAATTACTACAGCACTTTATAATGGTGCTAAAAAGGTTATACCAGTAGTTAGTGTTGAAGAGG
CTTTTGAAAAAGCAAATGAATTAAAATCTTTAGGTGAAGAAGTTTTACTTGGAGGAGAGAGAAAGGCTTTAAAAATAGAT
GGATTTGATTTCTCTAATTCTCCATTAGAATACAAAAGAGAAATAGTAGAAGGAAAAAATGTAATAATGTCTACTACAAA
TGGAACTAGAGCTTTAAATTTATGCAATAAAGCTGATAAAGTTATAGTTGCCTCTGTGTTAAATGGACAAGCGGTAGCTA
AATATTTAGAAAATGAAGAAAAAGAAATAGTCTTTGTTAATTCTGGAACAAACGGTGAATTTTCAAGTGATGATTTTATG
TGTGCAGGTTATATAATAAGTGAAATATGTAAAAATAAAGAGGCTGAACTTACTGATATAGCCAAAACAGCTAAATATGT
TTGTGAAAGCAGTGAAGGAATAGAAGAGTTTATAAAAGATGCGAAACACTATAATATTCTTAAAAATTTAGGACTAGAAG
AGGATTTAAAGTATTGTTCTACAAAAAATTTAATAGATTTAGTTTTTGAATTTAAAAATGGTGAAATAAAAACTGTGGAA
TCAGGAGTTAAAGTGACAATATAA

Upstream 100 bases:

>100_bases
GGGAAGTTTTAAATGCTATTGATAATGCTCTTGAAGATAATGATATTTATCAAGGAAAGAATTTTGAAGAATAATTTTAA
AAATAAGGTGGGGAATTTTT

Downstream 100 bases:

>100_bases
TAAAGTTTTGTGAAGTATTTTTATAAAAGATGAATAAATTTTAAAATAAAATAATAGGAGTAAAAACTACTTTTAATGTA
ATGTTTTTAAAACAAAAAAG

Product: 2-phosphosulfolactate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANELKSLGEEVLLGGERKALKID
GFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADKVIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFM
CAGYIISEICKNKEAELTDIAKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE
SGVKVTI

Sequences:

>Translated_247_residues
MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANELKSLGEEVLLGGERKALKID
GFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADKVIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFM
CAGYIISEICKNKEAELTDIAKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE
SGVKVTI
>Mature_247_residues
MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANELKSLGEEVLLGGERKALKID
GFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADKVIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFM
CAGYIISEICKNKEAELTDIAKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE
SGVKVTI

Specific function: Unknown

COG id: COG2045

COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005238
- InterPro:   IPR022995 [H]

Pfam domain/function: PF04029 2-ph_phosp [H]

EC number: =3.1.3.71 [H]

Molecular weight: Translated: 27190; Mature: 27190

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANE
CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEHHHHHHHHHH
LKSLGEEVLLGGERKALKIDGFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADK
HHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCC
VIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFMCAGYIISEICKNKEAELTDI
EEEEHHHCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
AKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHEECCCCCEEEEC
SGVKVTI
CCCEEEC
>Mature Secondary Structure
MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANE
CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEHHHHHHHHHH
LKSLGEEVLLGGERKALKIDGFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADK
HHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCC
VIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFMCAGYIISEICKNKEAELTDI
EEEEHHHCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
AKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHEECCCCCEEEEC
SGVKVTI
CCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA