| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is comB [H]
Identifier: 18311538
GI number: 18311538
Start: 2926607
End: 2927350
Strand: Reverse
Name: comB [H]
Synonym: CPE2556
Alternate gene names: 18311538
Gene position: 2927350-2926607 (Counterclockwise)
Preceding gene: 18311539
Following gene: 18311537
Centisome position: 96.57
GC content: 28.23
Gene sequence:
>744_bases ATGAAAATTGATGTTATAATTTCTGCAGATTATATAGATAGTGAATCACTTAAAGGAAAGATAGCTGTGGTTATAGATAT GTTAAGAGCTACATCTGTAATTACTACAGCACTTTATAATGGTGCTAAAAAGGTTATACCAGTAGTTAGTGTTGAAGAGG CTTTTGAAAAAGCAAATGAATTAAAATCTTTAGGTGAAGAAGTTTTACTTGGAGGAGAGAGAAAGGCTTTAAAAATAGAT GGATTTGATTTCTCTAATTCTCCATTAGAATACAAAAGAGAAATAGTAGAAGGAAAAAATGTAATAATGTCTACTACAAA TGGAACTAGAGCTTTAAATTTATGCAATAAAGCTGATAAAGTTATAGTTGCCTCTGTGTTAAATGGACAAGCGGTAGCTA AATATTTAGAAAATGAAGAAAAAGAAATAGTCTTTGTTAATTCTGGAACAAACGGTGAATTTTCAAGTGATGATTTTATG TGTGCAGGTTATATAATAAGTGAAATATGTAAAAATAAAGAGGCTGAACTTACTGATATAGCCAAAACAGCTAAATATGT TTGTGAAAGCAGTGAAGGAATAGAAGAGTTTATAAAAGATGCGAAACACTATAATATTCTTAAAAATTTAGGACTAGAAG AGGATTTAAAGTATTGTTCTACAAAAAATTTAATAGATTTAGTTTTTGAATTTAAAAATGGTGAAATAAAAACTGTGGAA TCAGGAGTTAAAGTGACAATATAA
Upstream 100 bases:
>100_bases GGGAAGTTTTAAATGCTATTGATAATGCTCTTGAAGATAATGATATTTATCAAGGAAAGAATTTTGAAGAATAATTTTAA AAATAAGGTGGGGAATTTTT
Downstream 100 bases:
>100_bases TAAAGTTTTGTGAAGTATTTTTATAAAAGATGAATAAATTTTAAAATAAAATAATAGGAGTAAAAACTACTTTTAATGTA ATGTTTTTAAAACAAAAAAG
Product: 2-phosphosulfolactate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANELKSLGEEVLLGGERKALKID GFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADKVIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFM CAGYIISEICKNKEAELTDIAKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE SGVKVTI
Sequences:
>Translated_247_residues MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANELKSLGEEVLLGGERKALKID GFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADKVIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFM CAGYIISEICKNKEAELTDIAKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE SGVKVTI >Mature_247_residues MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANELKSLGEEVLLGGERKALKID GFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADKVIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFM CAGYIISEICKNKEAELTDIAKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE SGVKVTI
Specific function: Unknown
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005238 - InterPro: IPR022995 [H]
Pfam domain/function: PF04029 2-ph_phosp [H]
EC number: =3.1.3.71 [H]
Molecular weight: Translated: 27190; Mature: 27190
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANE CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEHHHHHHHHHH LKSLGEEVLLGGERKALKIDGFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADK HHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCC VIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFMCAGYIISEICKNKEAELTDI EEEEHHHCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH AKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHEECCCCCEEEEC SGVKVTI CCCEEEC >Mature Secondary Structure MKIDVIISADYIDSESLKGKIAVVIDMLRATSVITTALYNGAKKVIPVVSVEEAFEKANE CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEHHHHHHHHHH LKSLGEEVLLGGERKALKIDGFDFSNSPLEYKREIVEGKNVIMSTTNGTRALNLCNKADK HHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCC VIVASVLNGQAVAKYLENEEKEIVFVNSGTNGEFSSDDFMCAGYIISEICKNKEAELTDI EEEEHHHCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH AKTAKYVCESSEGIEEFIKDAKHYNILKNLGLEEDLKYCSTKNLIDLVFEFKNGEIKTVE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHEECCCCCEEEEC SGVKVTI CCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA