Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18311537

Identifier: 18311537

GI number: 18311537

Start: 2925903

End: 2926346

Strand: Reverse

Name: 18311537

Synonym: CPE2555

Alternate gene names: NA

Gene position: 2926346-2925903 (Counterclockwise)

Preceding gene: 18311538

Following gene: 18311536

Centisome position: 96.53

GC content: 28.83

Gene sequence:

>444_bases
ATGAAGAAAAAATTATTAGTAGTTATTATTTCTGCCATAATGGGATTACAATTAGTTGGATGCGGAAGCTCTAATGATTC
ATCAAATAAAACCGCTTCTGATAATAAGCCTGCTGCAACTACAGAGAATAAAAGTAAGGTTGTAGATGATGATAGCTTAG
TTAATGAAGTAGCTGAGGTTTATCTTGATCTTAGAGAAGAATATTTAGAAGTACTTGAAAATAAACAAATGAATGAATGG
AATGAGGAGAAAGCAGATGCTTTAAAAGATTTAAAAGAAATTAAAGCAATGACTCCAGAAAGTGATAAGAATATAAATCA
AGCTATAGCAGATATAGAACAGTTAATAGATAAATATCAAAATAGCTTAGATGGTAAAGGTGCAGATCCAACAGGAATAC
AAAATTTAGAAGCACAAATTAAACAATTATTATTTGATAAATAA

Upstream 100 bases:

>100_bases
TTGATTTCTTGGTAAATAGTTAAAAGAACTTATTTGTTAATATGTATTGAGGAATATATGATGTTTATAGAGTGAGATAT
TTTTAAAGGAGATGTTTTTT

Downstream 100 bases:

>100_bases
TTAGAAAAAGAGGGGATTAAGGGCAATATCCCTCTTTTTTTATTTTATGGAAAGATTGTTAAATTTTTAATTTATTGAAA
ACAGTTTCAAGAGGTGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEVYLDLREEYLEVLENKQMNEW
NEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQNSLDGKGADPTGIQNLEAQIKQLLFDK

Sequences:

>Translated_147_residues
MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEVYLDLREEYLEVLENKQMNEW
NEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQNSLDGKGADPTGIQNLEAQIKQLLFDK
>Mature_147_residues
MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEVYLDLREEYLEVLENKQMNEW
NEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQNSLDGKGADPTGIQNLEAQIKQLLFDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16315; Mature: 16315

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YLDLREEYLEVLENKQMNEWNEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
NSLDGKGADPTGIQNLEAQIKQLLFDK
HHCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YLDLREEYLEVLENKQMNEWNEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
NSLDGKGADPTGIQNLEAQIKQLLFDK
HHCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA