| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311537
Identifier: 18311537
GI number: 18311537
Start: 2925903
End: 2926346
Strand: Reverse
Name: 18311537
Synonym: CPE2555
Alternate gene names: NA
Gene position: 2926346-2925903 (Counterclockwise)
Preceding gene: 18311538
Following gene: 18311536
Centisome position: 96.53
GC content: 28.83
Gene sequence:
>444_bases ATGAAGAAAAAATTATTAGTAGTTATTATTTCTGCCATAATGGGATTACAATTAGTTGGATGCGGAAGCTCTAATGATTC ATCAAATAAAACCGCTTCTGATAATAAGCCTGCTGCAACTACAGAGAATAAAAGTAAGGTTGTAGATGATGATAGCTTAG TTAATGAAGTAGCTGAGGTTTATCTTGATCTTAGAGAAGAATATTTAGAAGTACTTGAAAATAAACAAATGAATGAATGG AATGAGGAGAAAGCAGATGCTTTAAAAGATTTAAAAGAAATTAAAGCAATGACTCCAGAAAGTGATAAGAATATAAATCA AGCTATAGCAGATATAGAACAGTTAATAGATAAATATCAAAATAGCTTAGATGGTAAAGGTGCAGATCCAACAGGAATAC AAAATTTAGAAGCACAAATTAAACAATTATTATTTGATAAATAA
Upstream 100 bases:
>100_bases TTGATTTCTTGGTAAATAGTTAAAAGAACTTATTTGTTAATATGTATTGAGGAATATATGATGTTTATAGAGTGAGATAT TTTTAAAGGAGATGTTTTTT
Downstream 100 bases:
>100_bases TTAGAAAAAGAGGGGATTAAGGGCAATATCCCTCTTTTTTTATTTTATGGAAAGATTGTTAAATTTTTAATTTATTGAAA ACAGTTTCAAGAGGTGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEVYLDLREEYLEVLENKQMNEW NEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQNSLDGKGADPTGIQNLEAQIKQLLFDK
Sequences:
>Translated_147_residues MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEVYLDLREEYLEVLENKQMNEW NEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQNSLDGKGADPTGIQNLEAQIKQLLFDK >Mature_147_residues MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEVYLDLREEYLEVLENKQMNEW NEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQNSLDGKGADPTGIQNLEAQIKQLLFDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16315; Mature: 16315
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YLDLREEYLEVLENKQMNEWNEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH NSLDGKGADPTGIQNLEAQIKQLLFDK HHCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKKKLLVVIISAIMGLQLVGCGSSNDSSNKTASDNKPAATTENKSKVVDDDSLVNEVAEV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YLDLREEYLEVLENKQMNEWNEEKADALKDLKEIKAMTPESDKNINQAIADIEQLIDKYQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH NSLDGKGADPTGIQNLEAQIKQLLFDK HHCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA