| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is glpK [H]
Identifier: 18311534
GI number: 18311534
Start: 2922805
End: 2924307
Strand: Reverse
Name: glpK [H]
Synonym: CPE2552
Alternate gene names: 18311534
Gene position: 2924307-2922805 (Counterclockwise)
Preceding gene: 18311535
Following gene: 18311533
Centisome position: 96.47
GC content: 33.4
Gene sequence:
>1503_bases ATGAAAAAATATATAGTAGCATTAGATCAAGGAACAACAAGCTCTAGAGCAATAATTTTTGATAAAGAACAAAATATTAT TGGGGTAAGCCAAAAGGAATTTAATCAAATTTATCCTAGAGAAGGATGGGTTGAGCATGATCCAATGGAAATATGGGCAA CTCAATATAGTGTACTTCAAGAAGTTATGGCTAAATGTAATATAACTCAAGAAAATATAGCAGCCATTGGAATAACTAAC CAAAGAGAAACTACAATAGTTTGGGACAAAAATACAGGGGTTCCAATATACAATGCAATTGTTTGGCAATGTAGAAGAAC TGCTGATATATGCGATGAGTTAAAAGAAAGAGATGGACTTGTAGACTATATTAGAGAAAATACAGGACTTGTACTTGATG CATATTTTTCAGGAACAAAAATAAAATGGATATTAGATAATGTTGAAGGTGCAAGAGAAAAAGCTGAAAAGGGTGAGCTT TTATTTGGTACAGTAGATAGTTGGCTTGTTTGGAAGCTTACAAATGGAAAAGTTCATGTAACTGATTATACTAATGCATC TAGAACTATGATATTTAACATAAAGAACCTTCAATGGGATGAAAGAATGTTAAAGGAACTAGACATTCCTAGAAGTATGT TACCAGAAGTAAAAAATTCATCTGAAATTTACGGATATGCAAACCTTGGAGCAAAAGGTGGAATAAGAGTTCCTATAGCT GGAATAGCTGGGGACCAACAAGCTGCTTTATTTGGACAAGCTGCATTTAATAAAGGTGACGTAAAAAATACTTATGGAAC AGGATGTTTCTTATTAATGAACACAGGAGAAGAACTTGTTAAAAGTAAATCAGGACTTTTAACAACAATAGCTATTGGAT TACACGGAAAAGTTCAATATGCTTTAGAAGGATCAGTATTTGTTGGAGGAGCTGTTATCCAATGGCTTAGAGATGAATTA AGAATAATAAGTGATTCTAGTGATACTGAATACTTTGCTACAAAGGTAGAAGATAATGGTGGAGTATATGTTGTTCCTGC CTTCGTTGGATTAGGAGCTCCTTATTGGGATATGTATGCTCGTGGAACTATAGTAGGATTAACACGTGGAACTAATAGAA ATCATATAATAAGAGCAGCACTTGAATCAATTGCATATCAAACAAGAGATGTGCTTGAAGCTATGATAAACGATGTTGGA TATGATATAAATTGTATAAAAGTAGATGGAGGAGCAAGTAGAAATAATTTCTTAATGCAATTCCAATCAGATTTAGTTGG TAAAAAGGTAATTAAGCCTATAATTACAGAAACAACAGCTTTAGGAGCTGCTTACCTTGCAGGACTAGCAGTTGGTTACT GGAGTGATAAAGAAGAAATAGCTAAGTTATGGTTTGCAAGTGAAGAATTTGAGCCAACTATTTCTGAAGAGAGAAGAAAT AAATATCATAAGAAATGGAAAAAGGCTGTTGAAAGATCAAAGGGATGGGCACTTGAAGATTAA
Upstream 100 bases:
>100_bases GATAAAGAGGATGTCATGGAAGCTTTAAGATCAGGAGCAACATGTATATCAACAACAAAAGAGGATATATGGAAGATATA AAATTAAGAGGTGAGTTTTT
Downstream 100 bases:
>100_bases AAAAAGTCTGGAAACATTTACAGAAATATGATATAATTAAATAAAAGTTAATAAATAATTTTAATTTTGTGTGTAAGAGA GAAGAGAGCTAGACACAAAA
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MKKYIVALDQGTTSSRAIIFDKEQNIIGVSQKEFNQIYPREGWVEHDPMEIWATQYSVLQEVMAKCNITQENIAAIGITN QRETTIVWDKNTGVPIYNAIVWQCRRTADICDELKERDGLVDYIRENTGLVLDAYFSGTKIKWILDNVEGAREKAEKGEL LFGTVDSWLVWKLTNGKVHVTDYTNASRTMIFNIKNLQWDERMLKELDIPRSMLPEVKNSSEIYGYANLGAKGGIRVPIA GIAGDQQAALFGQAAFNKGDVKNTYGTGCFLLMNTGEELVKSKSGLLTTIAIGLHGKVQYALEGSVFVGGAVIQWLRDEL RIISDSSDTEYFATKVEDNGGVYVVPAFVGLGAPYWDMYARGTIVGLTRGTNRNHIIRAALESIAYQTRDVLEAMINDVG YDINCIKVDGGASRNNFLMQFQSDLVGKKVIKPIITETTALGAAYLAGLAVGYWSDKEEIAKLWFASEEFEPTISEERRN KYHKKWKKAVERSKGWALED
Sequences:
>Translated_500_residues MKKYIVALDQGTTSSRAIIFDKEQNIIGVSQKEFNQIYPREGWVEHDPMEIWATQYSVLQEVMAKCNITQENIAAIGITN QRETTIVWDKNTGVPIYNAIVWQCRRTADICDELKERDGLVDYIRENTGLVLDAYFSGTKIKWILDNVEGAREKAEKGEL LFGTVDSWLVWKLTNGKVHVTDYTNASRTMIFNIKNLQWDERMLKELDIPRSMLPEVKNSSEIYGYANLGAKGGIRVPIA GIAGDQQAALFGQAAFNKGDVKNTYGTGCFLLMNTGEELVKSKSGLLTTIAIGLHGKVQYALEGSVFVGGAVIQWLRDEL RIISDSSDTEYFATKVEDNGGVYVVPAFVGLGAPYWDMYARGTIVGLTRGTNRNHIIRAALESIAYQTRDVLEAMINDVG YDINCIKVDGGASRNNFLMQFQSDLVGKKVIKPIITETTALGAAYLAGLAVGYWSDKEEIAKLWFASEEFEPTISEERRN KYHKKWKKAVERSKGWALED >Mature_500_residues MKKYIVALDQGTTSSRAIIFDKEQNIIGVSQKEFNQIYPREGWVEHDPMEIWATQYSVLQEVMAKCNITQENIAAIGITN QRETTIVWDKNTGVPIYNAIVWQCRRTADICDELKERDGLVDYIRENTGLVLDAYFSGTKIKWILDNVEGAREKAEKGEL LFGTVDSWLVWKLTNGKVHVTDYTNASRTMIFNIKNLQWDERMLKELDIPRSMLPEVKNSSEIYGYANLGAKGGIRVPIA GIAGDQQAALFGQAAFNKGDVKNTYGTGCFLLMNTGEELVKSKSGLLTTIAIGLHGKVQYALEGSVFVGGAVIQWLRDEL RIISDSSDTEYFATKVEDNGGVYVVPAFVGLGAPYWDMYARGTIVGLTRGTNRNHIIRAALESIAYQTRDVLEAMINDVG YDINCIKVDGGASRNNFLMQFQSDLVGKKVIKPIITETTALGAAYLAGLAVGYWSDKEEIAKLWFASEEFEPTISEERRN KYHKKWKKAVERSKGWALED
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=503, Percent_Identity=48.7077534791253, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI4504007, Length=503, Percent_Identity=48.7077534791253, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI42794763, Length=507, Percent_Identity=48.1262327416174, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI41393575, Length=502, Percent_Identity=47.4103585657371, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI88196792, Length=508, Percent_Identity=33.6614173228346, Blast_Score=322, Evalue=7e-88, Organism=Escherichia coli, GI1790361, Length=499, Percent_Identity=68.937875751503, Blast_Score=730, Evalue=0.0, Organism=Escherichia coli, GI1787789, Length=486, Percent_Identity=25.3086419753086, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1790005, Length=504, Percent_Identity=22.6190476190476, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789987, Length=463, Percent_Identity=23.3261339092873, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1789168, Length=507, Percent_Identity=23.6686390532544, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535599, Length=505, Percent_Identity=41.7821782178218, Blast_Score=395, Evalue=1e-110, Organism=Caenorhabditis elegans, GI71986140, Length=525, Percent_Identity=26.2857142857143, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI71986147, Length=267, Percent_Identity=33.3333333333333, Blast_Score=141, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6321755, Length=548, Percent_Identity=38.3211678832117, Blast_Score=326, Evalue=6e-90, Organism=Drosophila melanogaster, GI17864214, Length=509, Percent_Identity=45.5795677799607, Blast_Score=423, Evalue=1e-118, Organism=Drosophila melanogaster, GI24655555, Length=502, Percent_Identity=42.4302788844622, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24655560, Length=502, Percent_Identity=42.4302788844622, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24655570, Length=502, Percent_Identity=42.4302788844622, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24655574, Length=502, Percent_Identity=42.4302788844622, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24655565, Length=502, Percent_Identity=42.4302788844622, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24654573, Length=437, Percent_Identity=47.5972540045767, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI19922058, Length=527, Percent_Identity=33.5863377609108, Blast_Score=295, Evalue=6e-80, Organism=Drosophila melanogaster, GI24652871, Length=493, Percent_Identity=34.2799188640974, Blast_Score=281, Evalue=9e-76, Organism=Drosophila melanogaster, GI24656367, Length=514, Percent_Identity=28.4046692607004, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI21357867, Length=529, Percent_Identity=27.9773156899811, Blast_Score=219, Evalue=5e-57, Organism=Drosophila melanogaster, GI24656372, Length=361, Percent_Identity=31.0249307479224, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI45552909, Length=302, Percent_Identity=29.1390728476821, Blast_Score=129, Evalue=5e-30,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 56002; Mature: 56002
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYIVALDQGTTSSRAIIFDKEQNIIGVSQKEFNQIYPREGWVEHDPMEIWATQYSVLQ CCCEEEEEECCCCCCEEEEEECCCCEEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH EVMAKCNITQENIAAIGITNQRETTIVWDKNTGVPIYNAIVWQCRRTADICDELKERDGL HHHHHCCCCHHHEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH VDYIRENTGLVLDAYFSGTKIKWILDNVEGAREKAEKGELLFGTVDSWLVWKLTNGKVHV HHHHHCCCCEEEEEEECCCEEEEEEECCHHHHHHHHCCCEEEEECCCEEEEEEECCEEEE TDYTNASRTMIFNIKNLQWDERMLKELDIPRSMLPEVKNSSEIYGYANLGAKGGIRVPIA EECCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCCCCCEEEEEE GIAGDQQAALFGQAAFNKGDVKNTYGTGCFLLMNTGEELVKSKSGLLTTIAIGLHGKVQY ECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCEEEEEEECCCEEEE ALEGSVFVGGAVIQWLRDELRIISDSSDTEYFATKVEDNGGVYVVPAFVGLGAPYWDMYA EEECCEEEHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCEEEEEHHHHCCCCHHHHHC RGTIVGLTRGTNRNHIIRAALESIAYQTRDVLEAMINDVGYDINCIKVDGGASRNNFLMQ CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEE FQSDLVGKKVIKPIITETTALGAAYLAGLAVGYWSDKEEIAKLWFASEEFEPTISEERRN EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHH KYHKKWKKAVERSKGWALED HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKYIVALDQGTTSSRAIIFDKEQNIIGVSQKEFNQIYPREGWVEHDPMEIWATQYSVLQ CCCEEEEEECCCCCCEEEEEECCCCEEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH EVMAKCNITQENIAAIGITNQRETTIVWDKNTGVPIYNAIVWQCRRTADICDELKERDGL HHHHHCCCCHHHEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH VDYIRENTGLVLDAYFSGTKIKWILDNVEGAREKAEKGELLFGTVDSWLVWKLTNGKVHV HHHHHCCCCEEEEEEECCCEEEEEEECCHHHHHHHHCCCEEEEECCCEEEEEEECCEEEE TDYTNASRTMIFNIKNLQWDERMLKELDIPRSMLPEVKNSSEIYGYANLGAKGGIRVPIA EECCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCCCCCEEEEEE GIAGDQQAALFGQAAFNKGDVKNTYGTGCFLLMNTGEELVKSKSGLLTTIAIGLHGKVQY ECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCEEEEEEECCCEEEE ALEGSVFVGGAVIQWLRDELRIISDSSDTEYFATKVEDNGGVYVVPAFVGLGAPYWDMYA EEECCEEEHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCEEEEEHHHHCCCCHHHHHC RGTIVGLTRGTNRNHIIRAALESIAYQTRDVLEAMINDVGYDINCIKVDGGASRNNFLMQ CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEE FQSDLVGKKVIKPIITETTALGAAYLAGLAVGYWSDKEEIAKLWFASEEFEPTISEERRN EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHH KYHKKWKKAVERSKGWALED HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA