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The map label for this gene is yfmR [H]

Identifier: 18311526

GI number: 18311526

Start: 2913823

End: 2915751

Strand: Reverse

Name: yfmR [H]

Synonym: CPE2544

Alternate gene names: 18311526

Gene position: 2915751-2913823 (Counterclockwise)

Preceding gene: 18311527

Following gene: 18311525

Centisome position: 96.18

GC content: 30.79

Gene sequence:

>1929_bases
ATGAATTTAATAACTCTTGAAAATATAAGTAAGAGCTATTCAGAAAAAATTTTAGCTAATAATATATCTTTAGGGATAAA
TGAAGGAGAGAAGATTGGTCTTATAGGAGTTAACGGAACTGGAAAGTCTTCTTTCTTAAAAATAGTTGCTGGAGTTGAAG
AACCAGACGAAGGAACAGTAACAAAGGGAAATAGAGTAAGAATAGAGTACCTTGCTCAAACACCAGATTATGATGATAAT
GCTACTGTTTTAGAGCAAGTTTTTAAGGGTAATTCAGAGGAAATGAGAATATTAAGAGAATACGAAGAGTTACTTGAAAA
AATAGATAAGGGTGAAGTTAAAGAGAATGATTCTGAAAGATTAATAAGGCTTCAAGGAAAAATAGATGCTTTAAATCTTT
GGGATATGGAAAGTGAAGCAAAGAATGTTTTAACTAAGCTTGGAATAACTAATTTTGAAGAAAAAGTAGGAAATCTTTCT
GGAGGACAAAAGAAGAGAATAATGCTTGCAGCTGCCTTAATAACTCCTTGTGAATTATTAATACTAGATGAGCCTACTAA
CCATTTAGATAATGAAACTATAAGTTGGTTAGAAGAATACTTAAATAGTAGAAAAGGCGCTCTTTTAATGATTACTCATG
ATAGATACTTCCTAGATAGAGTAACAAACAGAATATTAGAATTAGATAGAGGTAGGTTATTTAGCTATGATGGAAACTAT
TCTGTTTTCTTAGAAAAGAAGATGGAGAGAATAGCCATAGAAAAAGCCAGTGAGGAAAAAAGACAAAATCTTATGAGAAA
AGAACTAGCTTGGGTAAGAAGAGGTGCAAAGGCTAGAACTACTAAGCAAAAAGCTAGACTTCAAAGATTTGATGAATTAG
TAAATCAAGAAGGATTTATTGAAAATGAAAATATAGAAATCTCTGTTATGGGAACGAGATTGGGAAAGAAAATAATAGAG
ATAGAACACCTAAATAAAAGCTTTGGTGATAAAAAGATTGTTGATGATTTTAACTATATAGTACTAAGAAGTGATAGAAT
AGGTATTGTAGGACCTAATGGAATTGGTAAATCAACACTTATGGGAATGATAGAAGGAAAAGTTAAGCCAGATAGTGGAG
AAATAATAAAAGGTGAGACTGTAAAAATAGCTTGTTTCTCACAGGAAGATACACATATGCATCCAGAGATGAGAGCTATA
GATTACATAAAAGAAGCAGGAGAGTATTTACAAACTGCCACAGGTGAAAGAATAACTGCATCACAAATGTGTGAAAAGTT
TTTATTTGATGGAACACTTCAGTGGACAATGATAGGTATGTTATCTGGAGGAGAAAGAAGAAGACTTCACCTTTTAAGAG
TTCTAATGGAAGCCCCTAATGTGCTTTTACTAGATGAGCCTACAAATGATTTAGATATTGAAACTTTAAATAGATTAGAA
GATTATTTAGATGACTTTGGTGGAGTTGTCATAACTGTATCCCATGATAGATATTTCTTAGATAGAATTTGTAATAAGAT
ATTTTCTTATAAGGGAAATGGAAAAATAGATATTTATACTGGAAACTATGGGGATTATCTTCTAAGCAAAGAAGAAGAGA
TTGTTAACAATAAAGAAAAAGAGGTGGCTGTGGATAAAAATAAAAAAGAGCCATCTGTGGATAAAAATAAAAACAAGGGT
AAAGTATTAAAATTTTCATTTAAAGAGCAAAGAGAATTTGAAACTATAGATGAAGAAATAATGACTCTTGAAGAAAAAAT
AGAAGAATTAGATTCTTTAATGGCAAAACATGCATCAGAGTATGGTAGACTTCAAGAACTAATGGAAGAAAAAGCGAAAA
TTGAAGAAGAATTAGCCTTTAAATATGAGAGATGGGAATATCTTAATGAGTTAGCAGCACAAATAGAAGAAAACAAAAAG
AATAAATAA

Upstream 100 bases:

>100_bases
AAATTAGATTATTTGATGCAGCTCTTATTTTAGTTTTGGAAGAAACTTGAGTTTATATTATAATGAAAATAAGATTTATT
TTGAAAAGGATGGATAATCG

Downstream 100 bases:

>100_bases
AATTTATTTTCTTAGATAAGATATTATTTAGGTGAATAAATTAAATTTATATAAATTTGTAGAATTTCTAAAGATTCGAT
TATATACTAAACTAAAGTTA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MNLITLENISKSYSEKILANNISLGINEGEKIGLIGVNGTGKSSFLKIVAGVEEPDEGTVTKGNRVRIEYLAQTPDYDDN
ATVLEQVFKGNSEEMRILREYEELLEKIDKGEVKENDSERLIRLQGKIDALNLWDMESEAKNVLTKLGITNFEEKVGNLS
GGQKKRIMLAAALITPCELLILDEPTNHLDNETISWLEEYLNSRKGALLMITHDRYFLDRVTNRILELDRGRLFSYDGNY
SVFLEKKMERIAIEKASEEKRQNLMRKELAWVRRGAKARTTKQKARLQRFDELVNQEGFIENENIEISVMGTRLGKKIIE
IEHLNKSFGDKKIVDDFNYIVLRSDRIGIVGPNGIGKSTLMGMIEGKVKPDSGEIIKGETVKIACFSQEDTHMHPEMRAI
DYIKEAGEYLQTATGERITASQMCEKFLFDGTLQWTMIGMLSGGERRRLHLLRVLMEAPNVLLLDEPTNDLDIETLNRLE
DYLDDFGGVVITVSHDRYFLDRICNKIFSYKGNGKIDIYTGNYGDYLLSKEEEIVNNKEKEVAVDKNKKEPSVDKNKNKG
KVLKFSFKEQREFETIDEEIMTLEEKIEELDSLMAKHASEYGRLQELMEEKAKIEEELAFKYERWEYLNELAAQIEENKK
NK

Sequences:

>Translated_642_residues
MNLITLENISKSYSEKILANNISLGINEGEKIGLIGVNGTGKSSFLKIVAGVEEPDEGTVTKGNRVRIEYLAQTPDYDDN
ATVLEQVFKGNSEEMRILREYEELLEKIDKGEVKENDSERLIRLQGKIDALNLWDMESEAKNVLTKLGITNFEEKVGNLS
GGQKKRIMLAAALITPCELLILDEPTNHLDNETISWLEEYLNSRKGALLMITHDRYFLDRVTNRILELDRGRLFSYDGNY
SVFLEKKMERIAIEKASEEKRQNLMRKELAWVRRGAKARTTKQKARLQRFDELVNQEGFIENENIEISVMGTRLGKKIIE
IEHLNKSFGDKKIVDDFNYIVLRSDRIGIVGPNGIGKSTLMGMIEGKVKPDSGEIIKGETVKIACFSQEDTHMHPEMRAI
DYIKEAGEYLQTATGERITASQMCEKFLFDGTLQWTMIGMLSGGERRRLHLLRVLMEAPNVLLLDEPTNDLDIETLNRLE
DYLDDFGGVVITVSHDRYFLDRICNKIFSYKGNGKIDIYTGNYGDYLLSKEEEIVNNKEKEVAVDKNKKEPSVDKNKNKG
KVLKFSFKEQREFETIDEEIMTLEEKIEELDSLMAKHASEYGRLQELMEEKAKIEEELAFKYERWEYLNELAAQIEENKK
NK
>Mature_642_residues
MNLITLENISKSYSEKILANNISLGINEGEKIGLIGVNGTGKSSFLKIVAGVEEPDEGTVTKGNRVRIEYLAQTPDYDDN
ATVLEQVFKGNSEEMRILREYEELLEKIDKGEVKENDSERLIRLQGKIDALNLWDMESEAKNVLTKLGITNFEEKVGNLS
GGQKKRIMLAAALITPCELLILDEPTNHLDNETISWLEEYLNSRKGALLMITHDRYFLDRVTNRILELDRGRLFSYDGNY
SVFLEKKMERIAIEKASEEKRQNLMRKELAWVRRGAKARTTKQKARLQRFDELVNQEGFIENENIEISVMGTRLGKKIIE
IEHLNKSFGDKKIVDDFNYIVLRSDRIGIVGPNGIGKSTLMGMIEGKVKPDSGEIIKGETVKIACFSQEDTHMHPEMRAI
DYIKEAGEYLQTATGERITASQMCEKFLFDGTLQWTMIGMLSGGERRRLHLLRVLMEAPNVLLLDEPTNDLDIETLNRLE
DYLDDFGGVVITVSHDRYFLDRICNKIFSYKGNGKIDIYTGNYGDYLLSKEEEIVNNKEKEVAVDKNKKEPSVDKNKNKG
KVLKFSFKEQREFETIDEEIMTLEEKIEELDSLMAKHASEYGRLQELMEEKAKIEEELAFKYERWEYLNELAAQIEENKK
NK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=529, Percent_Identity=27.2211720226843, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI69354671, Length=532, Percent_Identity=28.9473684210526, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI10947135, Length=564, Percent_Identity=28.5460992907801, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI27881506, Length=549, Percent_Identity=27.3224043715847, Blast_Score=174, Evalue=3e-43,
Organism=Homo sapiens, GI10947137, Length=549, Percent_Identity=27.3224043715847, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI27436953, Length=252, Percent_Identity=27.3809523809524, Blast_Score=67, Evalue=8e-11,
Organism=Escherichia coli, GI2367384, Length=528, Percent_Identity=40.1515151515151, Blast_Score=386, Evalue=1e-108,
Organism=Escherichia coli, GI1787182, Length=643, Percent_Identity=33.2814930015552, Blast_Score=344, Evalue=9e-96,
Organism=Escherichia coli, GI1789751, Length=631, Percent_Identity=29.7939778129952, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1787041, Length=541, Percent_Identity=31.0536044362292, Blast_Score=248, Evalue=1e-66,
Organism=Escherichia coli, GI87081782, Length=569, Percent_Identity=23.725834797891, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1788506, Length=543, Percent_Identity=22.8360957642726, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1788225, Length=276, Percent_Identity=25.3623188405797, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1790525, Length=559, Percent_Identity=20.7513416815742, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788897, Length=541, Percent_Identity=23.6598890942699, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788165, Length=286, Percent_Identity=24.8251748251748, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI1789891, Length=247, Percent_Identity=25.9109311740891, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787029, Length=247, Percent_Identity=26.7206477732794, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1790544, Length=256, Percent_Identity=25, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI87081791, Length=243, Percent_Identity=28.8065843621399, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786703, Length=214, Percent_Identity=28.0373831775701, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=195, Percent_Identity=26.1538461538462, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1786872, Length=252, Percent_Identity=25.7936507936508, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786319, Length=207, Percent_Identity=29.4685990338164, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787758, Length=197, Percent_Identity=26.3959390862944, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI48994883, Length=240, Percent_Identity=27.5, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1789593, Length=207, Percent_Identity=28.0193236714976, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1788644, Length=244, Percent_Identity=27.8688524590164, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=568, Percent_Identity=28.6971830985916, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17555318, Length=560, Percent_Identity=26.4285714285714, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=28.5178236397749, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17555800, Length=504, Percent_Identity=22.8174603174603, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=241, Percent_Identity=29.4605809128631, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71992290, Length=200, Percent_Identity=27.5, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=260, Percent_Identity=26.5384615384615, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=233, Percent_Identity=25.3218884120172, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=533, Percent_Identity=30.5816135084428, Blast_Score=217, Evalue=5e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=548, Percent_Identity=29.1970802919708, Blast_Score=184, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6323278, Length=413, Percent_Identity=26.8765133171913, Blast_Score=123, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=415, Percent_Identity=26.7469879518072, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6325030, Length=410, Percent_Identity=25.8536585365854, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24642252, Length=559, Percent_Identity=28.9803220035778, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI18859989, Length=559, Percent_Identity=28.9803220035778, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24666836, Length=536, Percent_Identity=28.9179104477612, Blast_Score=202, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24641342, Length=575, Percent_Identity=27.8260869565217, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI28571209, Length=275, Percent_Identity=23.2727272727273, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24659289, Length=228, Percent_Identity=25.4385964912281, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73773; Mature: 73773

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLITLENISKSYSEKILANNISLGINEGEKIGLIGVNGTGKSSFLKIVAGVEEPDEGTV
CCEEEHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCC
TKGNRVRIEYLAQTPDYDDNATVLEQVFKGNSEEMRILREYEELLEKIDKGEVKENDSER
CCCCEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LIRLQGKIDALNLWDMESEAKNVLTKLGITNFEEKVGNLSGGQKKRIMLAAALITPCELL
EEEEECCCCEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHCCEEEE
ILDEPTNHLDNETISWLEEYLNSRKGALLMITHDRYFLDRVTNRILELDRGRLFSYDGNY
EEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCE
SVFLEKKMERIAIEKASEEKRQNLMRKELAWVRRGAKARTTKQKARLQRFDELVNQEGFI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCE
ENENIEISVMGTRLGKKIIEIEHLNKSFGDKKIVDDFNYIVLRSDRIGIVGPNGIGKSTL
ECCCEEEEEECHHHCHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCEEEECCCCCCHHHH
MGMIEGKVKPDSGEIIKGETVKIACFSQEDTHMHPEMRAIDYIKEAGEYLQTATGERITA
HHHHCCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
SQMCEKFLFDGTLQWTMIGMLSGGERRRLHLLRVLMEAPNVLLLDEPTNDLDIETLNRLE
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH
DYLDDFGGVVITVSHDRYFLDRICNKIFSYKGNGKIDIYTGNYGDYLLSKEEEIVNNKEK
HHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCHHHHCCCCC
EVAVDKNKKEPSVDKNKNKGKVLKFSFKEQREFETIDEEIMTLEEKIEELDSLMAKHASE
EEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGRLQELMEEKAKIEEELAFKYERWEYLNELAAQIEENKKNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLITLENISKSYSEKILANNISLGINEGEKIGLIGVNGTGKSSFLKIVAGVEEPDEGTV
CCEEEHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCC
TKGNRVRIEYLAQTPDYDDNATVLEQVFKGNSEEMRILREYEELLEKIDKGEVKENDSER
CCCCEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LIRLQGKIDALNLWDMESEAKNVLTKLGITNFEEKVGNLSGGQKKRIMLAAALITPCELL
EEEEECCCCEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHCCEEEE
ILDEPTNHLDNETISWLEEYLNSRKGALLMITHDRYFLDRVTNRILELDRGRLFSYDGNY
EEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCE
SVFLEKKMERIAIEKASEEKRQNLMRKELAWVRRGAKARTTKQKARLQRFDELVNQEGFI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCE
ENENIEISVMGTRLGKKIIEIEHLNKSFGDKKIVDDFNYIVLRSDRIGIVGPNGIGKSTL
ECCCEEEEEECHHHCHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCEEEECCCCCCHHHH
MGMIEGKVKPDSGEIIKGETVKIACFSQEDTHMHPEMRAIDYIKEAGEYLQTATGERITA
HHHHCCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
SQMCEKFLFDGTLQWTMIGMLSGGERRRLHLLRVLMEAPNVLLLDEPTNDLDIETLNRLE
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH
DYLDDFGGVVITVSHDRYFLDRICNKIFSYKGNGKIDIYTGNYGDYLLSKEEEIVNNKEK
HHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCHHHHCCCCC
EVAVDKNKKEPSVDKNKNKGKVLKFSFKEQREFETIDEEIMTLEEKIEELDSLMAKHASE
EEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGRLQELMEEKAKIEEELAFKYERWEYLNELAAQIEENKKNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]