Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is thiT [H]

Identifier: 18311527

GI number: 18311527

Start: 2915882

End: 2916487

Strand: Reverse

Name: thiT [H]

Synonym: CPE2545

Alternate gene names: 18311527

Gene position: 2916487-2915882 (Counterclockwise)

Preceding gene: 18311528

Following gene: 18311526

Centisome position: 96.21

GC content: 28.22

Gene sequence:

>606_bases
ATGAGTGTTTATTTAGTAGCTTTAATTGGAATTTTAATATTAGGTTTATACATATTAGATTTAAGAAAACATAAAATTAC
AACAAGAGAAATTATCATGATTGGACTAAGTGTAGCTATTTCTTATGTGCTTTATATGATACCTTTAGTTAGATATCCTC
AAGGTTGTGGAATAACTTTTTTTTCTATGCTTCCAATAATGCTTTTATCATTAGTATATGGAAGAACTGTTGGAGTTACA
GGAGGCTTAATATTTGGGCTTTTAAAAATATTAAATGGAGCTTTTATAGTACACCCAGTACAATTTTTACTTGATTATAT
ACTATCAAATATGGCTTTAGGACTAGCAGGATCATTTGGAATAGACAAGAAATATAAAATATTCCTTGGCTCACTTATGG
CTGGTAGTATAAGTACTTTTGTAAGCATAATATCAGGAGTGATTTTCTTTGGTCAATATGCTCCTCCAGGAATGAATTTA
TGGATTTATTCAATAATTTATAATACAAGCAGTGCAGGAGTTGAAAGTTTATTAACAGCTATAGTAATAACAATAATGCC
AATAAAAATGTTAGCTAAAAGAATGAAGCCTACAAATAATATATAG

Upstream 100 bases:

>100_bases
TATCTGAAGAAAAACAAAAAAGATTAATAGATATATTTAAAAGAGCTAGTTTGTACGAACTTGATTTTTGGAATATGGCG
TATGATGAAGGTGAAAAATA

Downstream 100 bases:

>100_bases
AAAATTTTAATAGGGAGTTGCATCATAATTAAATTAGATTATTTGATGCAGCTCTTATTTTAGTTTTGGAAGAAACTTGA
GTTTATATTATAATGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSVYLVALIGILILGLYILDLRKHKITTREIIMIGLSVAISYVLYMIPLVRYPQGCGITFFSMLPIMLLSLVYGRTVGVT
GGLIFGLLKILNGAFIVHPVQFLLDYILSNMALGLAGSFGIDKKYKIFLGSLMAGSISTFVSIISGVIFFGQYAPPGMNL
WIYSIIYNTSSAGVESLLTAIVITIMPIKMLAKRMKPTNNI

Sequences:

>Translated_201_residues
MSVYLVALIGILILGLYILDLRKHKITTREIIMIGLSVAISYVLYMIPLVRYPQGCGITFFSMLPIMLLSLVYGRTVGVT
GGLIFGLLKILNGAFIVHPVQFLLDYILSNMALGLAGSFGIDKKYKIFLGSLMAGSISTFVSIISGVIFFGQYAPPGMNL
WIYSIIYNTSSAGVESLLTAIVITIMPIKMLAKRMKPTNNI
>Mature_200_residues
SVYLVALIGILILGLYILDLRKHKITTREIIMIGLSVAISYVLYMIPLVRYPQGCGITFFSMLPIMLLSLVYGRTVGVTG
GLIFGLLKILNGAFIVHPVQFLLDYILSNMALGLAGSFGIDKKYKIFLGSLMAGSISTFVSIISGVIFFGQYAPPGMNLW
IYSIIYNTSSAGVESLLTAIVITIMPIKMLAKRMKPTNNI

Specific function: Probable proton-coupled thiamine transporter [H]

COG id: COG3859

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proton-coupled thiamine transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012651 [H]

Pfam domain/function: PF09515 Thia_YuaJ [H]

EC number: NA

Molecular weight: Translated: 21996; Mature: 21865

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYLVALIGILILGLYILDLRKHKITTREIIMIGLSVAISYVLYMIPLVRYPQGCGITF
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FSMLPIMLLSLVYGRTVGVTGGLIFGLLKILNGAFIVHPVQFLLDYILSNMALGLAGSFG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
IDKKYKIFLGSLMAGSISTFVSIISGVIFFGQYAPPGMNLWIYSIIYNTSSAGVESLLTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCHHHHHHHHHH
IVITIMPIKMLAKRMKPTNNI
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SVYLVALIGILILGLYILDLRKHKITTREIIMIGLSVAISYVLYMIPLVRYPQGCGITF
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FSMLPIMLLSLVYGRTVGVTGGLIFGLLKILNGAFIVHPVQFLLDYILSNMALGLAGSFG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
IDKKYKIFLGSLMAGSISTFVSIISGVIFFGQYAPPGMNLWIYSIIYNTSSAGVESLLTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCHHHHHHHHHH
IVITIMPIKMLAKRMKPTNNI
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]