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The map label for this gene is ccpA [H]

Identifier: 18311521

GI number: 18311521

Start: 2907177

End: 2908175

Strand: Reverse

Name: ccpA [H]

Synonym: CPE2539

Alternate gene names: 18311521

Gene position: 2908175-2907177 (Counterclockwise)

Preceding gene: 18311523

Following gene: 18311520

Centisome position: 95.93

GC content: 29.33

Gene sequence:

>999_bases
ATGGCTGCTTCAATTAAAGACGTTGCTAGAGAAGCTGGAGTGTCAATAGCAACAGTTTCAAGAGTATTAAATGACATAGA
CGTTGTAAACGAAGAAACTAAGAAAAAAGTTTTAGAAGCTATAAAAAAACTAGGATATAGACCTAATATAGTGGCAAGAA
GTTTAAAAACACATAGAACAAGAACTGTAGGTATATTAGTACCTGATATATCAAACCAAATATATCCTGAAATAGTTAGA
GGTGCTGAGGACGTAGCTAACATATATAAATATAATGTAATGTTATGTAATTCAGACTTAGATTTAGAAAAAGAAAAAGA
ATACTTAAGAGTTCTTAAGGAAAAAATGGTTGATGGTGTTCTTTACATGAGTTCATCACTAGGAGAAGAAACTTTAAATT
TAATAAATGAATTAGATTTAAAAACAGTTTTAGTTGAAAATGATGAGCAAAATGGTAAGTTCCCAAGTGTAACTATAGAT
AATGAAAAAGCTACATATGAAGCTACTAATCATTTGATTGATAAAGGTATGAAAAACATAGCTTTCATAGGTGTAGAAGG
TGATTTAAATAATGCTTGGGGTAAAAGATACAAAGGATACCAAGCTGCATTAAAAGATGCTGGAATAGAAATGAAAGAAG
AATTAACTTACTTTAAAAACTTAAAGGTTAAGACTGGATATGATGCTATTTTAGCAATGCTTGAAAATGGTCAAAAAATA
GAAGGAATAATCTGTGCTTCAGATGAAATAGCTATGGGTGCTATAAACGCTTTAAGAGATAAAGGAATAAAGGTTCCTGA
AGAAGTTAGCGTTATAGGATTTAATGACATAGATTTAGCACATGTATTCTATCCAAAATTAACTACTGTATCACAACCAA
TGTATGATATGGGATCAATAGCTATGAGAATGTTAATTAAAATAATAAATAATAAACCTTTAGATCAAGATCATTTTGTA
TTAGATCATGATTTAATAGAGAGAGATAGCTGTAAGTAA

Upstream 100 bases:

>100_bases
AATATACATAAATTCCTTGTATAAATGTAAAGTTATCATTATAATATTGAAGTATTAAGAAATAGATAGGCAATAAGTTA
GAGTATAGGAGTTGAGTTAG

Downstream 100 bases:

>100_bases
TTAATGCATAAAAAATGCATAATCATTAGGTAACATAAGATTAAATTATGTTACCTTTTTTTATTTATGGAAAAATTTAA
ATTTTAGTAAGGGAGGAGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MAASIKDVAREAGVSIATVSRVLNDIDVVNEETKKKVLEAIKKLGYRPNIVARSLKTHRTRTVGILVPDISNQIYPEIVR
GAEDVANIYKYNVMLCNSDLDLEKEKEYLRVLKEKMVDGVLYMSSSLGEETLNLINELDLKTVLVENDEQNGKFPSVTID
NEKATYEATNHLIDKGMKNIAFIGVEGDLNNAWGKRYKGYQAALKDAGIEMKEELTYFKNLKVKTGYDAILAMLENGQKI
EGIICASDEIAMGAINALRDKGIKVPEEVSVIGFNDIDLAHVFYPKLTTVSQPMYDMGSIAMRMLIKIINNKPLDQDHFV
LDHDLIERDSCK

Sequences:

>Translated_332_residues
MAASIKDVAREAGVSIATVSRVLNDIDVVNEETKKKVLEAIKKLGYRPNIVARSLKTHRTRTVGILVPDISNQIYPEIVR
GAEDVANIYKYNVMLCNSDLDLEKEKEYLRVLKEKMVDGVLYMSSSLGEETLNLINELDLKTVLVENDEQNGKFPSVTID
NEKATYEATNHLIDKGMKNIAFIGVEGDLNNAWGKRYKGYQAALKDAGIEMKEELTYFKNLKVKTGYDAILAMLENGQKI
EGIICASDEIAMGAINALRDKGIKVPEEVSVIGFNDIDLAHVFYPKLTTVSQPMYDMGSIAMRMLIKIINNKPLDQDHFV
LDHDLIERDSCK
>Mature_331_residues
AASIKDVAREAGVSIATVSRVLNDIDVVNEETKKKVLEAIKKLGYRPNIVARSLKTHRTRTVGILVPDISNQIYPEIVRG
AEDVANIYKYNVMLCNSDLDLEKEKEYLRVLKEKMVDGVLYMSSSLGEETLNLINELDLKTVLVENDEQNGKFPSVTIDN
EKATYEATNHLIDKGMKNIAFIGVEGDLNNAWGKRYKGYQAALKDAGIEMKEELTYFKNLKVKTGYDAILAMLENGQKIE
GIICASDEIAMGAINALRDKGIKVPEEVSVIGFNDIDLAHVFYPKLTTVSQPMYDMGSIAMRMLIKIINNKPLDQDHFVL
DHDLIERDSCK

Specific function: Involved in the regulation of amylase production [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787948, Length=330, Percent_Identity=34.5454545454545, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1790369, Length=332, Percent_Identity=32.2289156626506, Blast_Score=188, Evalue=5e-49,
Organism=Escherichia coli, GI1790194, Length=331, Percent_Identity=33.8368580060423, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1788474, Length=308, Percent_Identity=31.1688311688312, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1789202, Length=328, Percent_Identity=30.4878048780488, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI1789068, Length=301, Percent_Identity=31.5614617940199, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI48994940, Length=309, Percent_Identity=28.8025889967638, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1790715, Length=323, Percent_Identity=26.3157894736842, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1787580, Length=335, Percent_Identity=26.865671641791, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1787906, Length=321, Percent_Identity=27.4143302180685, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789456, Length=318, Percent_Identity=29.559748427673, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790689, Length=315, Percent_Identity=25.7142857142857, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1786540, Length=331, Percent_Identity=23.8670694864048, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1786268, Length=311, Percent_Identity=21.2218649517685, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37193; Mature: 37062

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASIKDVAREAGVSIATVSRVLNDIDVVNEETKKKVLEAIKKLGYRPNIVARSLKTHRT
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
RTVGILVPDISNQIYPEIVRGAEDVANIYKYNVMLCNSDLDLEKEKEYLRVLKEKMVDGV
EEEEEEECCCCCHHHHHHHHCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
LYMSSSLGEETLNLINELDLKTVLVENDEQNGKFPSVTIDNEKATYEATNHLIDKGMKNI
HHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCE
AFIGVEGDLNNAWGKRYKGYQAALKDAGIEMKEELTYFKNLKVKTGYDAILAMLENGQKI
EEEEEECCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEE
EGIICASDEIAMGAINALRDKGIKVPEEVSVIGFNDIDLAHVFYPKLTTVSQPMYDMGSI
EEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCHHHHCCCHHHHHHH
AMRMLIKIINNKPLDQDHFVLDHDLIERDSCK
HHHHHHHHHCCCCCCCCCEEECHHHHCCCCCC
>Mature Secondary Structure 
AASIKDVAREAGVSIATVSRVLNDIDVVNEETKKKVLEAIKKLGYRPNIVARSLKTHRT
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
RTVGILVPDISNQIYPEIVRGAEDVANIYKYNVMLCNSDLDLEKEKEYLRVLKEKMVDGV
EEEEEEECCCCCHHHHHHHHCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
LYMSSSLGEETLNLINELDLKTVLVENDEQNGKFPSVTIDNEKATYEATNHLIDKGMKNI
HHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCE
AFIGVEGDLNNAWGKRYKGYQAALKDAGIEMKEELTYFKNLKVKTGYDAILAMLENGQKI
EEEEEECCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEE
EGIICASDEIAMGAINALRDKGIKVPEEVSVIGFNDIDLAHVFYPKLTTVSQPMYDMGSI
EEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCHHHHCCCHHHHHHH
AMRMLIKIINNKPLDQDHFVLDHDLIERDSCK
HHHHHHHHHCCCCCCCCCEEECHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7539689 [H]