Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311520

Identifier: 18311520

GI number: 18311520

Start: 2906644

End: 2907078

Strand: Reverse

Name: 18311520

Synonym: CPE2538

Alternate gene names: NA

Gene position: 2907078-2906644 (Counterclockwise)

Preceding gene: 18311521

Following gene: 18311519

Centisome position: 95.9

GC content: 26.9

Gene sequence:

>435_bases
TTGGAGGTGAAAAATAAGAGAAAATTAATAATATTAGGCTTAATTCTTTTCGCCCTAATAGGTATATATATTGGAAAAAA
CTATATTGAGGGAATAAAGCAAATAAATTTTCAGTCAATTAATGTGGTTGAAAATTTAGAAGAAGCAAAAGAGGGCATAC
CAACAATAATAATGTTTAAAACAGATACTTGTCCTTATTGTGTCGAAATGCAAAAAGAGTTAAGTTATGTTTCAAAAGAA
AGAGAAGGAAAATTTAATATTTACTATGCTAGATTAGAAGAGGAGAAAAATATAGATTTAGCATATAAATATGATGCTAA
TGTTGTTCCAACTACTGTGTTTTTAGATAAAGAAGGTAATAAATTCTATGTTCATCAAGGGCTTATGAGAAAGAATAATA
TAGAAACCATTTTAAATTCTTTGGGGGTTAAATAG

Upstream 100 bases:

>100_bases
AATTAATGCATAAAAAATGCATAATCATTAGGTAACATAAGATTAAATTATGTTACCTTTTTTTATTTATGGAAAAATTT
AAATTTTAGTAAGGGAGGAG

Downstream 100 bases:

>100_bases
AATATGGAATTTTTAGCTTATTTTAATATTAGCATATCTAATAATATATTTTTAGCCATAATACTATCATTCTTTGCAGG
AGTAGTAGCCTCTTTTAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKE
REGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK

Sequences:

>Translated_144_residues
MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKE
REGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK
>Mature_144_residues
MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKE
REGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16694; Mature: 16694

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFK
CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE
TDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGN
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCC
KFYVHQGLMRKNNIETILNSLGVK
EEEEECCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFK
CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE
TDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGN
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCC
KFYVHQGLMRKNNIETILNSLGVK
EEEEECCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA