| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311520
Identifier: 18311520
GI number: 18311520
Start: 2906644
End: 2907078
Strand: Reverse
Name: 18311520
Synonym: CPE2538
Alternate gene names: NA
Gene position: 2907078-2906644 (Counterclockwise)
Preceding gene: 18311521
Following gene: 18311519
Centisome position: 95.9
GC content: 26.9
Gene sequence:
>435_bases TTGGAGGTGAAAAATAAGAGAAAATTAATAATATTAGGCTTAATTCTTTTCGCCCTAATAGGTATATATATTGGAAAAAA CTATATTGAGGGAATAAAGCAAATAAATTTTCAGTCAATTAATGTGGTTGAAAATTTAGAAGAAGCAAAAGAGGGCATAC CAACAATAATAATGTTTAAAACAGATACTTGTCCTTATTGTGTCGAAATGCAAAAAGAGTTAAGTTATGTTTCAAAAGAA AGAGAAGGAAAATTTAATATTTACTATGCTAGATTAGAAGAGGAGAAAAATATAGATTTAGCATATAAATATGATGCTAA TGTTGTTCCAACTACTGTGTTTTTAGATAAAGAAGGTAATAAATTCTATGTTCATCAAGGGCTTATGAGAAAGAATAATA TAGAAACCATTTTAAATTCTTTGGGGGTTAAATAG
Upstream 100 bases:
>100_bases AATTAATGCATAAAAAATGCATAATCATTAGGTAACATAAGATTAAATTATGTTACCTTTTTTTATTTATGGAAAAATTT AAATTTTAGTAAGGGAGGAG
Downstream 100 bases:
>100_bases AATATGGAATTTTTAGCTTATTTTAATATTAGCATATCTAATAATATATTTTTAGCCATAATACTATCATTCTTTGCAGG AGTAGTAGCCTCTTTTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKE REGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK
Sequences:
>Translated_144_residues MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKE REGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK >Mature_144_residues MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKE REGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16694; Mature: 16694
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFK CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE TDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGN CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCC KFYVHQGLMRKNNIETILNSLGVK EEEEECCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MEVKNKRKLIILGLILFALIGIYIGKNYIEGIKQINFQSINVVENLEEAKEGIPTIIMFK CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE TDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANVVPTTVFLDKEGN CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCC KFYVHQGLMRKNNIETILNSLGVK EEEEECCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA