| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is punA [H]
Identifier: 18311477
GI number: 18311477
Start: 2857020
End: 2857838
Strand: Direct
Name: punA [H]
Synonym: CPE2495
Alternate gene names: 18311477
Gene position: 2857020-2857838 (Clockwise)
Preceding gene: 18311476
Following gene: 18311478
Centisome position: 94.25
GC content: 33.94
Gene sequence:
>819_bases ATGGATTTATCAAACAAAATTAAAGCAGCTGCTGAGTACATAAAAGGTAAAAGTAAATATAACCCAACAATAGGATTAAT ATTAGGATCAGGATTAGGAGCTATAGCTGATCAAATAGAAGATGCTGAATATTTCCCATACAACGAAATTCCAAACTTCC CTGTATCTACAGTTGAAGGTCATGCTGGAAGATTAGTTATAGGAAAATTCCAAGGTAAAGAAGTTGTTGCAATGCAAGGA AGATTCCACTACTACGAAGGTTACTCAATGCAAGAAGTTACTTGCCCAGTAAGAGTAATGAGATTATTAGGAGTTGAAAC TTTAGTAGTTACTAACGCTGCTGGAGCAGTTAACAAAGATTATACTCCTGGAGATTTAATGATAATATCAGACCACTTAA ATTTATCAGGATCAAATCCTTTAATAGGTAAAAACTTAAATGAATTCGGTACTAGATTCCCTGATATGTCAAATGCATAT GATAAAGCTTTAAGAGCTCAAGTTAAAGATATAGCTAAAAATTTAGGAATAGAAGTAAGAGAAGGTGTATATGCTATGTT TAGTGGCCCAACTTACGAAACTCCTGCAGAAGTAAGAATGGCTAGAATATTAGGAGCAGATGCAGTTGGTATGTCAACAG TTCCTGAAGTTATAATAGCTAACCACAGTGGAATGAAAGTTATAGGTGTATCATGCATGACTAACATGGCTGCTGGTATC TTAGAACAACCACTTAACCATGAAGAAGTTATGGAAACTTCAGCTAAAGTTAGAAAGACATTCATAGAGTTAATGACTAA CATTATAAAAGAGATTTAA
Upstream 100 bases:
>100_bases AGAATTTTATACATTTTAAAGTAAGCGTTACCACATACTAGAAATATTCCACAATTAAAATCATTACTAAAATAAAATTT CATTAAAGAGGTGTAGAGTT
Downstream 100 bases:
>100_bases TAAAAAGTTAAATTAATATATTTCTTAACTTTTGTTAAATATAAAATTAGTATAAAAACATAAGAAAAGGAGAATAAATG TGGATAGGTTTATTGGTGTA
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MDLSNKIKAAAEYIKGKSKYNPTIGLILGSGLGAIADQIEDAEYFPYNEIPNFPVSTVEGHAGRLVIGKFQGKEVVAMQG RFHYYEGYSMQEVTCPVRVMRLLGVETLVVTNAAGAVNKDYTPGDLMIISDHLNLSGSNPLIGKNLNEFGTRFPDMSNAY DKALRAQVKDIAKNLGIEVREGVYAMFSGPTYETPAEVRMARILGADAVGMSTVPEVIIANHSGMKVIGVSCMTNMAAGI LEQPLNHEEVMETSAKVRKTFIELMTNIIKEI
Sequences:
>Translated_272_residues MDLSNKIKAAAEYIKGKSKYNPTIGLILGSGLGAIADQIEDAEYFPYNEIPNFPVSTVEGHAGRLVIGKFQGKEVVAMQG RFHYYEGYSMQEVTCPVRVMRLLGVETLVVTNAAGAVNKDYTPGDLMIISDHLNLSGSNPLIGKNLNEFGTRFPDMSNAY DKALRAQVKDIAKNLGIEVREGVYAMFSGPTYETPAEVRMARILGADAVGMSTVPEVIIANHSGMKVIGVSCMTNMAAGI LEQPLNHEEVMETSAKVRKTFIELMTNIIKEI >Mature_272_residues MDLSNKIKAAAEYIKGKSKYNPTIGLILGSGLGAIADQIEDAEYFPYNEIPNFPVSTVEGHAGRLVIGKFQGKEVVAMQG RFHYYEGYSMQEVTCPVRVMRLLGVETLVVTNAAGAVNKDYTPGDLMIISDHLNLSGSNPLIGKNLNEFGTRFPDMSNAY DKALRAQVKDIAKNLGIEVREGVYAMFSGPTYETPAEVRMARILGADAVGMSTVPEVIIANHSGMKVIGVSCMTNMAAGI LEQPLNHEEVMETSAKVRKTFIELMTNIIKEI
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=273, Percent_Identity=49.8168498168498, Blast_Score=268, Evalue=5e-72, Organism=Homo sapiens, GI47132622, Length=205, Percent_Identity=26.3414634146341, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1788746, Length=256, Percent_Identity=45.3125, Blast_Score=244, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17541190, Length=264, Percent_Identity=43.5606060606061, Blast_Score=221, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6323238, Length=262, Percent_Identity=45.0381679389313, Blast_Score=202, Evalue=5e-53, Organism=Drosophila melanogaster, GI45552887, Length=275, Percent_Identity=49.0909090909091, Blast_Score=263, Evalue=7e-71, Organism=Drosophila melanogaster, GI45552885, Length=275, Percent_Identity=49.0909090909091, Blast_Score=263, Evalue=8e-71, Organism=Drosophila melanogaster, GI24656093, Length=275, Percent_Identity=49.0909090909091, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI24656090, Length=275, Percent_Identity=49.0909090909091, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI24762376, Length=239, Percent_Identity=38.9121338912134, Blast_Score=163, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 29641; Mature: 29641
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSNKIKAAAEYIKGKSKYNPTIGLILGSGLGAIADQIEDAEYFPYNEIPNFPVSTVEG CCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC HAGRLVIGKFQGKEVVAMQGRFHYYEGYSMQEVTCPVRVMRLLGVETLVVTNAAGAVNKD CCCEEEEEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCHHHEEEECCCCCCCCC YTPGDLMIISDHLNLSGSNPLIGKNLNEFGTRFPDMSNAYDKALRAQVKDIAKNLGIEVR CCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEC EGVYAMFSGPTYETPAEVRMARILGADAVGMSTVPEVIIANHSGMKVIGVSCMTNMAAGI CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHCCCEEEECCCCCEEEHHHHHHHHHHHH LEQPLNHEEVMETSAKVRKTFIELMTNIIKEI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDLSNKIKAAAEYIKGKSKYNPTIGLILGSGLGAIADQIEDAEYFPYNEIPNFPVSTVEG CCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC HAGRLVIGKFQGKEVVAMQGRFHYYEGYSMQEVTCPVRVMRLLGVETLVVTNAAGAVNKD CCCEEEEEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCHHHEEEECCCCCCCCC YTPGDLMIISDHLNLSGSNPLIGKNLNEFGTRFPDMSNAYDKALRAQVKDIAKNLGIEVR CCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEC EGVYAMFSGPTYETPAEVRMARILGADAVGMSTVPEVIIANHSGMKVIGVSCMTNMAAGI CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHCCCEEEECCCCCEEEHHHHHHHHHHHH LEQPLNHEEVMETSAKVRKTFIELMTNIIKEI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9058965 [H]