| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is purR [H]
Identifier: 18311474
GI number: 18311474
Start: 2853116
End: 2853919
Strand: Reverse
Name: purR [H]
Synonym: CPE2492
Alternate gene names: 18311474
Gene position: 2853919-2853116 (Counterclockwise)
Preceding gene: 18311479
Following gene: 18311473
Centisome position: 94.14
GC content: 28.98
Gene sequence:
>804_bases ATGGAGAAGTTAAGTAGAAATAGTAGAGTATCGATTATAACAAAAGTTCTTATAGAAAATCCTAATAAAATAATAGGATT AAATAAGTTTTCAGATCTTTTAAATGCAGCTAAATCAACTATAAGTGAAGATATAGTTATTGTTAGAGAAGTGTTATCTA AGTTTTCTATGGGAAAAGTTGAGACAATAGCTGGTGCTGCTGGTGGAATAAGATATATTCCAGAAGTAGGAGAAGTAGAA AAAAGAAAGTTTTTAGAAGAATTATGTGATATTGCAAGTGAAAGCAATAGAGTTGTTCCAGGTAATTTTTTATATGTTAC AGATATAATGTTTAATCCAAGTATAATAAGTAAAGCTTCTATTATATTAGCATCTTATTTTCAAGACATGGATATAGACT ATGTAATAACTGTGGAAACTAAGGGAGTTCCATTAGCTTACGAAGTAGCTAAATGCTTAGGAGTACAATTAATAACAGCA AGAAGAGATAGTAAAGTAACAGAAGGATCTACAGTTTCAATAAACTATGTTTCAGGAACATCAGGCAAAATACAACAAAT GTGTTTATCTAGAAAATCATTAAAGCAAGGAAGTAAATGCATATTTATAGATGACTTTATGAGAGGCGGCGGAACTGCTA AAGGTTTAGTTGATTTATTAAAAGAATTCGATTCTGAACTTATGGGAATTGGAGTATTAATAGATAATAAATTATCAACA AACAAAATAACAAAAGATTATGTCTCTTTAATTGATATTGTTGAGATAAATGAGGATGGAGTGAAAATGGTACCATCTAT GTAA
Upstream 100 bases:
>100_bases GAAAAATATTTATAAAAATATATGTGTTTTATAAAGAATAAAATATGAATTATAAGTGGAAAATATATACTGGGAAATTT ATATAGGTCAGGTGATTAAT
Downstream 100 bases:
>100_bases TTTCTACAGTTGTTGTGTTAAAGAATAATTTACAAAAAATATGAAAAAAAGAAGGATTTCTATATTTTTCATAGAATATA CATAATAACAACAACTGGAG
Product: pur operon repressor
Products: AMP; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MEKLSRNSRVSIITKVLIENPNKIIGLNKFSDLLNAAKSTISEDIVIVREVLSKFSMGKVETIAGAAGGIRYIPEVGEVE KRKFLEELCDIASESNRVVPGNFLYVTDIMFNPSIISKASIILASYFQDMDIDYVITVETKGVPLAYEVAKCLGVQLITA RRDSKVTEGSTVSINYVSGTSGKIQQMCLSRKSLKQGSKCIFIDDFMRGGGTAKGLVDLLKEFDSELMGIGVLIDNKLST NKITKDYVSLIDIVEINEDGVKMVPSM
Sequences:
>Translated_267_residues MEKLSRNSRVSIITKVLIENPNKIIGLNKFSDLLNAAKSTISEDIVIVREVLSKFSMGKVETIAGAAGGIRYIPEVGEVE KRKFLEELCDIASESNRVVPGNFLYVTDIMFNPSIISKASIILASYFQDMDIDYVITVETKGVPLAYEVAKCLGVQLITA RRDSKVTEGSTVSINYVSGTSGKIQQMCLSRKSLKQGSKCIFIDDFMRGGGTAKGLVDLLKEFDSELMGIGVLIDNKLST NKITKDYVSLIDIVEINEDGVKMVPSM >Mature_267_residues MEKLSRNSRVSIITKVLIENPNKIIGLNKFSDLLNAAKSTISEDIVIVREVLSKFSMGKVETIAGAAGGIRYIPEVGEVE KRKFLEELCDIASESNRVVPGNFLYVTDIMFNPSIISKASIILASYFQDMDIDYVITVETKGVPLAYEVAKCLGVQLITA RRDSKVTEGSTVSINYVSGTSGKIQQMCLSRKSLKQGSKCIFIDDFMRGGGTAKGLVDLLKEFDSELMGIGVLIDNKLST NKITKDYVSLIDIVEINEDGVKMVPSM
Specific function: Controls the transcription of the pur operon for purine biosynthetic genes [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR015265 - InterPro: IPR010078 - InterPro: IPR011991 - ProDom: PD029816 [H]
Pfam domain/function: PF00156 Pribosyltran; PF09182 PuR_N [H]
EC number: 2.4.2.7 [C]
Molecular weight: Translated: 29282; Mature: 29282
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLSRNSRVSIITKVLIENPNKIIGLNKFSDLLNAAKSTISEDIVIVREVLSKFSMGKV CCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ETIAGAAGGIRYIPEVGEVEKRKFLEELCDIASESNRVVPGNFLYVTDIMFNPSIISKAS HHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHH IILASYFQDMDIDYVITVETKGVPLAYEVAKCLGVQLITARRDSKVTEGSTVSINYVSGT HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCC SGKIQQMCLSRKSLKQGSKCIFIDDFMRGGGTAKGLVDLLKEFDSELMGIGVLIDNKLST CHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCC NKITKDYVSLIDIVEINEDGVKMVPSM CHHHHHHHHHHHHEEECCCCCEECCCC >Mature Secondary Structure MEKLSRNSRVSIITKVLIENPNKIIGLNKFSDLLNAAKSTISEDIVIVREVLSKFSMGKV CCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ETIAGAAGGIRYIPEVGEVEKRKFLEELCDIASESNRVVPGNFLYVTDIMFNPSIISKAS HHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHH IILASYFQDMDIDYVITVETKGVPLAYEVAKCLGVQLITARRDSKVTEGSTVSINYVSGT HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCC SGKIQQMCLSRKSLKQGSKCIFIDDFMRGGGTAKGLVDLLKEFDSELMGIGVLIDNKLST CHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCC NKITKDYVSLIDIVEINEDGVKMVPSM CHHHHHHHHHHHHEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): 560 [C]
Specific activity: 14
Km value (mM): 0.02 {adenine}} 0.125 {5-phospho-alpha-D-ribose} [C]
Substrates: Adenine; 5-Phospho-alpha-D-ribose 1-diphosphate [C]
Specific reaction: Adenine + 5-Phospho-alpha-D-ribose 1-diphosphate --> AMP + Diphosphate [C]
General reaction: Pentosyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]