| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is prs
Identifier: 18311471
GI number: 18311471
Start: 2850143
End: 2851102
Strand: Reverse
Name: prs
Synonym: CPE2489
Alternate gene names: 18311471
Gene position: 2851102-2850143 (Counterclockwise)
Preceding gene: 18311472
Following gene: 18311470
Centisome position: 94.05
GC content: 32.08
Gene sequence:
>960_bases ATGGAAAATCATTCAAAAAACATAAAAATATTTACAGGTAATTCTCATCCAGAATTAGCTAGAGAGATTGCAAAGGCGCT AAACATTCCTCTAGGTAAAGCTGAAGTTGGTACTTTCAGTGATGGAGAAATATCAGTAAATATAAAAGAAACTGTTAGAG GTTGCGATGTATTTATAGTTCAATCAACTTGTAGTCCTGTAAATAATAACTTAATGGAGTTATTAATAATGATAGATGCC TTTAAAAGAGCATCAGCAGGAAGAATAAATGCGGTTATACCTTACTATGGATATGCTAGACAAGATAGAAAAGCTAAGTC AAGAGATCCAATAACAGCTAAGTTAGTAGCTGACCTATTAACAGCAGCGGGTGCAGATAGAGTTCTTACTATGGATTTAC ATGCAGCACAAATTCAAGGTTATTTTAATATACCAGTAGATCACTTATTAGGCTCACCAATTTTAGCAAAATATTTTGTT GAAAAAGGATTAGCTGATAGAGATGATGTAGTTGTTGTTTCACCAGATTTAGGTTCAGTAACTAGAGCTAGAAAGTTTGC AGATAAACTTAATGCTCCAATAGCTATAATTGATAAAAGAAGACCAAAAGCAAATGTATCTGAAATAATGAATATAATAG GAGATGTTAAGGACAAAGTTTGTATCTTAATAGACGATATGATAGACACTGCAGGAACAATAACTAATGCAGCTAATGCT CTTAAAGATTTAGGAGCAAAAAATGTATATGCTTGTTGTACTCATGGAGTATTATCAGGTCCTGCATTTGAAAGAATAAA TAACAGTGCTATTGAAGAGTTAGTTATGTTAAATACTATAGCTCTTCCAGAGGGAGAAGGTTTAAATAAGTTTAAATCAT TATCAGTTGCACCAATTATGGCAGATGCAATAAATAGAATTTATGATGATGAACCATTAAGTGGATTATTCCAAGACTAA
Upstream 100 bases:
>100_bases AACAAAACATAGAGGGCTGGGTTGAAAGAAAAAAGCTTAAATAAGCATTAAATATACAAATGCCAAAGGCTAGGTTTAAT TTTAAGGAGGTCTTCACTAA
Downstream 100 bases:
>100_bases AAAAAAGAGCGCATATGTCGCTCTTTTTTTTATAAAATCACTAAAAATTGAAACTTTTTTTAAACAAAAACGTTTAAATT TGATTAAAATGTAAAAATAA
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MENHSKNIKIFTGNSHPELAREIAKALNIPLGKAEVGTFSDGEISVNIKETVRGCDVFIVQSTCSPVNNNLMELLIMIDA FKRASAGRINAVIPYYGYARQDRKAKSRDPITAKLVADLLTAAGADRVLTMDLHAAQIQGYFNIPVDHLLGSPILAKYFV EKGLADRDDVVVVSPDLGSVTRARKFADKLNAPIAIIDKRRPKANVSEIMNIIGDVKDKVCILIDDMIDTAGTITNAANA LKDLGAKNVYACCTHGVLSGPAFERINNSAIEELVMLNTIALPEGEGLNKFKSLSVAPIMADAINRIYDDEPLSGLFQD
Sequences:
>Translated_319_residues MENHSKNIKIFTGNSHPELAREIAKALNIPLGKAEVGTFSDGEISVNIKETVRGCDVFIVQSTCSPVNNNLMELLIMIDA FKRASAGRINAVIPYYGYARQDRKAKSRDPITAKLVADLLTAAGADRVLTMDLHAAQIQGYFNIPVDHLLGSPILAKYFV EKGLADRDDVVVVSPDLGSVTRARKFADKLNAPIAIIDKRRPKANVSEIMNIIGDVKDKVCILIDDMIDTAGTITNAANA LKDLGAKNVYACCTHGVLSGPAFERINNSAIEELVMLNTIALPEGEGLNKFKSLSVAPIMADAINRIYDDEPLSGLFQD >Mature_319_residues MENHSKNIKIFTGNSHPELAREIAKALNIPLGKAEVGTFSDGEISVNIKETVRGCDVFIVQSTCSPVNNNLMELLIMIDA FKRASAGRINAVIPYYGYARQDRKAKSRDPITAKLVADLLTAAGADRVLTMDLHAAQIQGYFNIPVDHLLGSPILAKYFV EKGLADRDDVVVVSPDLGSVTRARKFADKLNAPIAIIDKRRPKANVSEIMNIIGDVKDKVCILIDDMIDTAGTITNAANA LKDLGAKNVYACCTHGVLSGPAFERINNSAIEELVMLNTIALPEGEGLNKFKSLSVAPIMADAINRIYDDEPLSGLFQD
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family
Homologues:
Organism=Homo sapiens, GI4506127, Length=314, Percent_Identity=50.6369426751592, Blast_Score=310, Evalue=1e-84, Organism=Homo sapiens, GI4506129, Length=314, Percent_Identity=49.6815286624204, Blast_Score=309, Evalue=3e-84, Organism=Homo sapiens, GI84875539, Length=317, Percent_Identity=49.211356466877, Blast_Score=303, Evalue=2e-82, Organism=Homo sapiens, GI28557709, Length=314, Percent_Identity=49.3630573248408, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI4506133, Length=346, Percent_Identity=36.7052023121387, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI194018537, Length=347, Percent_Identity=36.3112391930836, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI310128524, Length=144, Percent_Identity=34.7222222222222, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI310115209, Length=144, Percent_Identity=34.7222222222222, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI310118259, Length=144, Percent_Identity=34.7222222222222, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI310119946, Length=144, Percent_Identity=34.7222222222222, Blast_Score=86, Evalue=4e-17, Organism=Escherichia coli, GI1787458, Length=315, Percent_Identity=55.5555555555556, Blast_Score=349, Evalue=1e-97, Organism=Caenorhabditis elegans, GI17554702, Length=314, Percent_Identity=48.7261146496815, Blast_Score=300, Evalue=6e-82, Organism=Caenorhabditis elegans, GI25149168, Length=314, Percent_Identity=48.7261146496815, Blast_Score=300, Evalue=6e-82, Organism=Caenorhabditis elegans, GI71989924, Length=314, Percent_Identity=48.7261146496815, Blast_Score=299, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17554704, Length=311, Percent_Identity=48.2315112540193, Blast_Score=295, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17570245, Length=343, Percent_Identity=34.402332361516, Blast_Score=206, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6319403, Length=313, Percent_Identity=47.6038338658147, Blast_Score=276, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6320946, Length=315, Percent_Identity=47.6190476190476, Blast_Score=276, Evalue=4e-75, Organism=Saccharomyces cerevisiae, GI6321776, Length=317, Percent_Identity=45.1104100946372, Blast_Score=265, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6322667, Length=200, Percent_Identity=43.5, Blast_Score=169, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6324511, Length=95, Percent_Identity=50.5263157894737, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI21355239, Length=321, Percent_Identity=49.8442367601246, Blast_Score=305, Evalue=3e-83, Organism=Drosophila melanogaster, GI45551540, Length=344, Percent_Identity=46.5116279069767, Blast_Score=291, Evalue=3e-79, Organism=Drosophila melanogaster, GI281362873, Length=364, Percent_Identity=33.2417582417582, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24651454, Length=364, Percent_Identity=33.2417582417582, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24651458, Length=364, Percent_Identity=33.2417582417582, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24651456, Length=364, Percent_Identity=33.2417582417582, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24651462, Length=210, Percent_Identity=38.5714285714286, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24651464, Length=210, Percent_Identity=38.5714285714286, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI45552010, Length=210, Percent_Identity=38.5714285714286, Blast_Score=145, Evalue=3e-35,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): KPRS_CLOPE (Q8XHJ4)
Other databases:
- EMBL: BA000016 - RefSeq: NP_563405.1 - ProteinModelPortal: Q8XHJ4 - SMR: Q8XHJ4 - GeneID: 990867 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE2489 - NMPDR: fig|195102.1.peg.2552 - HOGENOM: HBG519284 - OMA: CATHAVF - PhylomeDB: Q8XHJ4 - ProtClustDB: PRK01259 - BioCyc: CPER195102:CPE2489-MONOMER - BRENDA: 2.7.6.1 - GO: GO:0005737 - HAMAP: MF_00583_B - InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 - TIGRFAMs: TIGR01251
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.7.6.1
Molecular weight: Translated: 34579; Mature: 34579
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00114 PRPP_SYNTHASE; PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENHSKNIKIFTGNSHPELAREIAKALNIPLGKAEVGTFSDGEISVNIKETVRGCDVFIV CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCEEEEE QSTCSPVNNNLMELLIMIDAFKRASAGRINAVIPYYGYARQDRKAKSRDPITAKLVADLL ECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCCCCCHHHHHHHHHH TAAGADRVLTMDLHAAQIQGYFNIPVDHLLGSPILAKYFVEKGLADRDDVVVVSPDLGSV HHCCCCCEEEEEEHHHHHCCEECCCHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCHH TRARKFADKLNAPIAIIDKRRPKANVSEIMNIIGDVKDKVCILIDDMIDTAGTITNAANA HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHH LKDLGAKNVYACCTHGVLSGPAFERINNSAIEELVMLNTIALPEGEGLNKFKSLSVAPIM HHHCCCCCHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHH ADAINRIYDDEPLSGLFQD HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MENHSKNIKIFTGNSHPELAREIAKALNIPLGKAEVGTFSDGEISVNIKETVRGCDVFIV CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCEEEEE QSTCSPVNNNLMELLIMIDAFKRASAGRINAVIPYYGYARQDRKAKSRDPITAKLVADLL ECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCCCCCHHHHHHHHHH TAAGADRVLTMDLHAAQIQGYFNIPVDHLLGSPILAKYFVEKGLADRDDVVVVSPDLGSV HHCCCCCEEEEEEHHHHHCCEECCCHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCHH TRARKFADKLNAPIAIIDKRRPKANVSEIMNIIGDVKDKVCILIDDMIDTAGTITNAANA HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHH LKDLGAKNVYACCTHGVLSGPAFERINNSAIEELVMLNTIALPEGEGLNKFKSLSVAPIM HHHCCCCCHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHH ADAINRIYDDEPLSGLFQD HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842