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The map label for this gene is spoVB [H]

Identifier: 18311463

GI number: 18311463

Start: 2838786

End: 2840318

Strand: Reverse

Name: spoVB [H]

Synonym: CPE2481

Alternate gene names: 18311463

Gene position: 2840318-2838786 (Counterclockwise)

Preceding gene: 18311464

Following gene: 18311462

Centisome position: 93.7

GC content: 29.94

Gene sequence:

>1533_bases
ATGAAGAAACAATCCCTTATAAAAGGTAGTCTTGTACTTGCTTGTGCTGGTATTTTAGCCAAGTTTCTTGGTTTATTTTT
TAGATGGCCATTAATAATGTTAATAGGAGATGAAGGTTTAGGATATTATCAAATGACCTATCCCTTATATATGCTTTTTG
TTGCCATTGCAGCAGGTATACCTATAGCAGTATCTAAATTAGTATCTGAAAAAAATGCTCTAGGAAAGTATGAGGAAAGT
TTTCAGGTAATAAAAGAAGCTTTAAAGGTAATGGTTTTACTAGGAATAGGGACAAGCATCTTTTTAGCTGTAGGTGGTAA
ATTTCTTTTACCGTTTTTAAAATGGGATGATAAGGCCTATTATTCTATACTAGGAATTTGTTTAGCTCCTACATTAATAG
GAATAATAACCCCTATTAGAGGTTTTTTTCAAGGATTTCAGAATATGACTCCAACTGCTATATCTCAAATACTAGAGCAA
ATAGGTAGAGTTATAGTTGGTGTTGGATTAGCTTATATATTGATAGATAAAGGAATTGAATACTCAGCAGGGGGAGCATC
ATTTGGAGCAGTAGCTGGAGCCTTTGTAGCAGCCTTATATTTAATTCCTAAATATAGAAAGATAAAAAATAGTTTTAAAC
TAGGTAAGATAAAAGGTAGTCATAAAATATTTATGGAAATAATAAATATAGCTCTTCCTATATCTATAGGGGCTGCCGTA
GGAAGTGTTATGGGGGTTATAGATTCTGTCTTAGTTCCTCAAAAGCTTTTACAAGCTGGGTTTACTGGGCAAGAGGCTAC
AGTTTTATATGCTCAGCTTACAGGGAAAGCTACTGTGTTTACTAATATTCCTATGACCTTAGCCACTGCATTAGCTGCCT
CAATAATACCTATAATTTCTGAATTATATATTCTTAAAGATAAAGTACAAGTTAAACAAAAAATAGATACTACAATGAAA
TTATGTATGATAGTTTCTATTCCATGTTTTTTAGGTTTATTTTTTATGGCAGAACCTATAATGAATCTTTTATTTCCAGG
AAAAGCTGATGGATTTATGATATTAAAATATTTATCAATTAGTGTTCCATTTTTAGTTGGGACGCAGATAACAACATCCA
TATTACAAGGAATGGGATATTATTATAGACCTGTTTTTCATCTTTTTATAGGGTGTATATTAAAAGTGGTATTAACTATG
AATTTAATACCTATAAGATCTTTAAACATTTATGGTGCTGTAATAGCAACAATAATATCTTATTCTGTGGTATTAATATT
AAATTTAATATATATGGCTAAGAGATTTAAATATGCTCCAAATATAAAAGATGTAATAATAAAGCCTATCTTCGCATCAA
TTTTAATGATTGGTACAGTTTTATATTTATATACACAAGCTTTAAAATATAGCGGAAGTAACAGTATATCTTGCTTAATA
GCTGTATTTGTGGGTATTATTATATATATGATATCATTGTTTGTACTTAAAATTTTTAGCGTAGAAGAAATAAAGGGACG
GCTAAGAAATTAA

Upstream 100 bases:

>100_bases
TAGAGAAAGTAAATCTTTACTTAAATTAAGTAATATTAAATCCACGCACTTTTTATAGTATTTTAATATAATTTGGTTAA
TTTAAATTTGGAGGTATTTT

Downstream 100 bases:

>100_bases
TTTTTATAAGTTGCGAAGGAGAATATGGAATGCTTAAGATAATGGGTCTAGGGCCAGGTGCCTATGAAGCATTAACAATA
GGTGCTTTAAAAGAATTAAA

Product: stage V sporulation protein B

Products: NA

Alternate protein names: Stage III sporulation protein F [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKKQSLIKGSLVLACAGILAKFLGLFFRWPLIMLIGDEGLGYYQMTYPLYMLFVAIAAGIPIAVSKLVSEKNALGKYEES
FQVIKEALKVMVLLGIGTSIFLAVGGKFLLPFLKWDDKAYYSILGICLAPTLIGIITPIRGFFQGFQNMTPTAISQILEQ
IGRVIVGVGLAYILIDKGIEYSAGGASFGAVAGAFVAALYLIPKYRKIKNSFKLGKIKGSHKIFMEIINIALPISIGAAV
GSVMGVIDSVLVPQKLLQAGFTGQEATVLYAQLTGKATVFTNIPMTLATALAASIIPIISELYILKDKVQVKQKIDTTMK
LCMIVSIPCFLGLFFMAEPIMNLLFPGKADGFMILKYLSISVPFLVGTQITTSILQGMGYYYRPVFHLFIGCILKVVLTM
NLIPIRSLNIYGAVIATIISYSVVLILNLIYMAKRFKYAPNIKDVIIKPIFASILMIGTVLYLYTQALKYSGSNSISCLI
AVFVGIIIYMISLFVLKIFSVEEIKGRLRN

Sequences:

>Translated_510_residues
MKKQSLIKGSLVLACAGILAKFLGLFFRWPLIMLIGDEGLGYYQMTYPLYMLFVAIAAGIPIAVSKLVSEKNALGKYEES
FQVIKEALKVMVLLGIGTSIFLAVGGKFLLPFLKWDDKAYYSILGICLAPTLIGIITPIRGFFQGFQNMTPTAISQILEQ
IGRVIVGVGLAYILIDKGIEYSAGGASFGAVAGAFVAALYLIPKYRKIKNSFKLGKIKGSHKIFMEIINIALPISIGAAV
GSVMGVIDSVLVPQKLLQAGFTGQEATVLYAQLTGKATVFTNIPMTLATALAASIIPIISELYILKDKVQVKQKIDTTMK
LCMIVSIPCFLGLFFMAEPIMNLLFPGKADGFMILKYLSISVPFLVGTQITTSILQGMGYYYRPVFHLFIGCILKVVLTM
NLIPIRSLNIYGAVIATIISYSVVLILNLIYMAKRFKYAPNIKDVIIKPIFASILMIGTVLYLYTQALKYSGSNSISCLI
AVFVGIIIYMISLFVLKIFSVEEIKGRLRN
>Mature_510_residues
MKKQSLIKGSLVLACAGILAKFLGLFFRWPLIMLIGDEGLGYYQMTYPLYMLFVAIAAGIPIAVSKLVSEKNALGKYEES
FQVIKEALKVMVLLGIGTSIFLAVGGKFLLPFLKWDDKAYYSILGICLAPTLIGIITPIRGFFQGFQNMTPTAISQILEQ
IGRVIVGVGLAYILIDKGIEYSAGGASFGAVAGAFVAALYLIPKYRKIKNSFKLGKIKGSHKIFMEIINIALPISIGAAV
GSVMGVIDSVLVPQKLLQAGFTGQEATVLYAQLTGKATVFTNIPMTLATALAASIIPIISELYILKDKVQVKQKIDTTMK
LCMIVSIPCFLGLFFMAEPIMNLLFPGKADGFMILKYLSISVPFLVGTQITTSILQGMGYYYRPVFHLFIGCILKVVLTM
NLIPIRSLNIYGAVIATIISYSVVLILNLIYMAKRFKYAPNIKDVIIKPIFASILMIGTVLYLYTQALKYSGSNSISCLI
AVFVGIIIYMISLFVLKIFSVEEIKGRLRN

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 55789; Mature: 55789

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377 [H]