| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is coaX [H]
Identifier: 18311450
GI number: 18311450
Start: 2824139
End: 2824918
Strand: Reverse
Name: coaX [H]
Synonym: CPE2468
Alternate gene names: 18311450
Gene position: 2824918-2824139 (Counterclockwise)
Preceding gene: 18311451
Following gene: 18311449
Centisome position: 93.19
GC content: 30.38
Gene sequence:
>780_bases ATGATTTTATTAATAGATGTAGGTAATACAAATATAGTTTTAGGGATTCATGATAATGAAAAATACATAGCATCATGGAG AATATCTACAGATTCTAAGAAAACATCAGATGAATATTCAATACAAGTTATGCAACTATTTAATCAAGCAAAATTAAATC CAGAAGATGTTGAAGGAATAATAATTTCTTCAGTAGTTCCTAATATAATGCATTCTTTAGAGAACATGGTTAGAAAATGT TTCTGCAAAGAACCTATTGTAGTAGGACCTGGAATAAAAACTGGAATTAATATAAAATATGATAATCCTAAAGAGGTTGG AGCAGATAGAATAGTAAATGCTGTAGCTGCTTTTGAAAAGCATAAAAAACCTATGATAATAATAGATTTTGGAACAGCAA CAACATTCTGTGCCATTACTGAAAAGGGAGATTATTTAGGTGGAAATATATGTCCTGGAATTCAAATTTCAGCAGATGCT TTATTTGAGAGAGCTGCAAAGCTTCCAAGAATAGAACTTGAAAAACCAAAGAGTGTAATTTGTAAAAATACAGTTACAAG CATGCAAGCTGGAATAATTTATGGATATATTGGAAAAGTTGAATATATAGTTAAACGTATGAAAAAGGAAATGATGGACT TAGGAGAAAAGGAACCATTTGTATTAGCTACAGGAGGGCTAGCTAAACTTGTTTATAGCGAAACGGATGTAATTGATGAA GTAGATCGTAAATTAACTTTAGAAGGGCTTAAGATTCTTTACGAAAAAAACAAGGAGTAG
Upstream 100 bases:
>100_bases TAGTAGTTGTTAAAATTAATATTGTTATATAAAGGGTACATGGTATTTTCCGGACAGCTTTATTAGCTGTCTTTAATTAT ATTAAGGTGGTGTAAAACAC
Downstream 100 bases:
>100_bases AAAGTAATGAAAATATCAAACATAGTTTTAGAAAATAATGTTTTCTTAGCACCTATGGCAGGGGTTACAGATATATCTTT TAGGGGATTATGTAAAGAGA
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MILLIDVGNTNIVLGIHDNEKYIASWRISTDSKKTSDEYSIQVMQLFNQAKLNPEDVEGIIISSVVPNIMHSLENMVRKC FCKEPIVVGPGIKTGINIKYDNPKEVGADRIVNAVAAFEKHKKPMIIIDFGTATTFCAITEKGDYLGGNICPGIQISADA LFERAAKLPRIELEKPKSVICKNTVTSMQAGIIYGYIGKVEYIVKRMKKEMMDLGEKEPFVLATGGLAKLVYSETDVIDE VDRKLTLEGLKILYEKNKE
Sequences:
>Translated_259_residues MILLIDVGNTNIVLGIHDNEKYIASWRISTDSKKTSDEYSIQVMQLFNQAKLNPEDVEGIIISSVVPNIMHSLENMVRKC FCKEPIVVGPGIKTGINIKYDNPKEVGADRIVNAVAAFEKHKKPMIIIDFGTATTFCAITEKGDYLGGNICPGIQISADA LFERAAKLPRIELEKPKSVICKNTVTSMQAGIIYGYIGKVEYIVKRMKKEMMDLGEKEPFVLATGGLAKLVYSETDVIDE VDRKLTLEGLKILYEKNKE >Mature_259_residues MILLIDVGNTNIVLGIHDNEKYIASWRISTDSKKTSDEYSIQVMQLFNQAKLNPEDVEGIIISSVVPNIMHSLENMVRKC FCKEPIVVGPGIKTGINIKYDNPKEVGADRIVNAVAAFEKHKKPMIIIDFGTATTFCAITEKGDYLGGNICPGIQISADA LFERAAKLPRIELEKPKSVICKNTVTSMQAGIIYGYIGKVEYIVKRMKKEMMDLGEKEPFVLATGGLAKLVYSETDVIDE VDRKLTLEGLKILYEKNKE
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis [H]
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004619 [H]
Pfam domain/function: PF03309 Bvg_acc_factor [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 28820; Mature: 28820
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLIDVGNTNIVLGIHDNEKYIASWRISTDSKKTSDEYSIQVMQLFNQAKLNPEDVEGI CEEEEEECCCEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHE IISSVVPNIMHSLENMVRKCFCKEPIVVGPGIKTGINIKYDNPKEVGADRIVNAVAAFEK EHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH HKKPMIIIDFGTATTFCAITEKGDYLGGNICPGIQISADALFERAAKLPRIELEKPKSVI CCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHCCCCEECCCCCHHH CKNTVTSMQAGIIYGYIGKVEYIVKRMKKEMMDLGEKEPFVLATGGLAKLVYSETDVIDE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCHHHHHHH VDRKLTLEGLKILYEKNKE HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILLIDVGNTNIVLGIHDNEKYIASWRISTDSKKTSDEYSIQVMQLFNQAKLNPEDVEGI CEEEEEECCCEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHE IISSVVPNIMHSLENMVRKCFCKEPIVVGPGIKTGINIKYDNPKEVGADRIVNAVAAFEK EHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH HKKPMIIIDFGTATTFCAITEKGDYLGGNICPGIQISADALFERAAKLPRIELEKPKSVI CCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHCCCCEECCCCCHHH CKNTVTSMQAGIIYGYIGKVEYIVKRMKKEMMDLGEKEPFVLATGGLAKLVYSETDVIDE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCHHHHHHH VDRKLTLEGLKILYEKNKE HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA