Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is gmk

Identifier: 18311434

GI number: 18311434

Start: 2798306

End: 2798896

Strand: Reverse

Name: gmk

Synonym: CPE2452

Alternate gene names: NA

Gene position: 2798896-2798306 (Counterclockwise)

Preceding gene: 18311435

Following gene: 18311433

Centisome position: 92.33

GC content: 25.89

Gene sequence:

>591_bases
ATGGGTAAAATATTTTGCATAATGGGGAAAAGTGGTTCTGGTAAGGATACTATTTTAAAAGAGATAAATAAGGTTGAAGA
TTTAAATTTAAAAACTATAGTTACATATACAACTAGACCTAAAAGAAATAATGAAACAGATGGAGTGGAATATTTCTTTA
TAGATAAAGAAAAGCTAGATGATTTTAACAGAGAAGGTAAGATAATAGAATGTAGAGTTTATGATACTGTTCATGGAAAA
TGGTATTACCTAACTGTAGATGATGGCCAAATAAACTTAGAAGAAAATAATTATATAGTTATTGTAACTTTAGAGGCTTA
TTCTGAGTTTAGAAAATATTTTGGAGATGAAAAATTAGTACCACTTTACATAGACTTAGATGATGGAGTTAGACTTGAAA
GAGCATTAAAAAGAGAGAGAGAACAGAAAAGTCCTAATTATAATGAGATGTGCAGAAGATTTTTAGCAGATAATGAAGAT
TTTAGTGAAGATAAATTACTAAATAACAATATAATTAAGAAATATAACAATTACAATTTAGAAGAATGTATAAGTGAAAT
ATGTGATGTAATAAGAAAAACTTCTAAATAA

Upstream 100 bases:

>100_bases
TTGTATTAAAATTATTACATAAAACTTTTTAGGGAGTTTTATAGAATTTATTTAATATATTTTTAGAGAAAAAAACGTGT
TTATATAGATTGGAGTAGTT

Downstream 100 bases:

>100_bases
TCTGGGGGAAAATAATATGAAAAATGCATTAAAGTTAACTTTTATTGGATTTCTAATAATATTAGTAGGAATATACTTAG
CGGTTTCTGATATAGATACA

Product: guanylate kinase-like protein

Products: NA

Alternate protein names: Guanylate Kinase/L-Type Calcium Channel Region; Guanylate Kinase-Like Protein

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MGKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLDDFNREGKIIECRVYDTVHGK
WYYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLVPLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNED
FSEDKLLNNNIIKKYNNYNLEECISEICDVIRKTSK

Sequences:

>Translated_196_residues
MGKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLDDFNREGKIIECRVYDTVHGK
WYYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLVPLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNED
FSEDKLLNNNIIKKYNNYNLEECISEICDVIRKTSK
>Mature_195_residues
GKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLDDFNREGKIIECRVYDTVHGKW
YYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLVPLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNEDF
SEDKLLNNNIIKKYNNYNLEECISEICDVIRKTSK

Specific function: Unknown

COG id: COG0194

COG function: function code F; Guanylate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23209; Mature: 23077

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLD
CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEHHHHH
DFNREGKIIECRVYDTVHGKWYYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLV
CCCCCCCEEEEEEEEEECCEEEEEEEECCEEEEECCCEEEEEEEHHHHHHHHHCCCCCEE
PLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNEDFSEDKLLNNNIIKKYNNYNL
EEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCCCCH
EECISEICDVIRKTSK
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLD
CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEHHHHH
DFNREGKIIECRVYDTVHGKWYYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLV
CCCCCCCEEEEEEEEEECCEEEEEEEECCEEEEECCCEEEEEEEHHHHHHHHHCCCCCEE
PLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNEDFSEDKLLNNNIIKKYNNYNL
EEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCCCCH
EECISEICDVIRKTSK
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA