Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yaaQ [H]

Identifier: 18311432

GI number: 18311432

Start: 2797648

End: 2797977

Strand: Reverse

Name: yaaQ [H]

Synonym: CPE2450

Alternate gene names: 18311432

Gene position: 2797977-2797648 (Counterclockwise)

Preceding gene: 18311433

Following gene: 18311431

Centisome position: 92.3

GC content: 31.52

Gene sequence:

>330_bases
ATGAAATTAGTAATATCTATAGTTCAAGATGATGATGCTTTAGATTTAGTTGATGCGTTAAATGAGAAAGGTTATAGTGT
AACTAAATTAGCTACAACAGGTGGATTTTTAAAATCAGGAAATACTACACTTTTAGCTGGGGTTCAAAAAGAAAAGGTTG
ATGATGTTATAAGTATAATAAAAGATATATGCCAAACAAGAAAGGGCGTTGTAAGTTCATCTGCAAGTGTTTCAGAACCA
GGTGGAGTGTATATACCATATCCTATGGAAGTGCAGGTTGGAGGAGCTACAATATTTGTTGTTGATGTAGATAAATTTAT
AAAGATTTAA

Upstream 100 bases:

>100_bases
TTAAAGCAATAATAAGGTTTGGTTAAGGGTTGTAAATAATGATATAATTATTTAAAACATAAATTTGAATTTTAGGGTAG
AGATGTGAGGAGGACGTGTT

Downstream 100 bases:

>100_bases
AATAGAAAGGAAAGTGCATAAATGATAGGTCACAATAAAGTTAGAGATAGATTTAGTAAAAGTGTAAGTAAAAATGCACT
TTCCCATGCTCATTTAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISIIKDICQTRKGVVSSSASVSEP
GGVYIPYPMEVQVGGATIFVVDVDKFIKI

Sequences:

>Translated_109_residues
MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISIIKDICQTRKGVVSSSASVSEP
GGVYIPYPMEVQVGGATIFVVDVDKFIKI
>Mature_109_residues
MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISIIKDICQTRKGVVSSSASVSEP
GGVYIPYPMEVQVGGATIFVVDVDKFIKI

Specific function: Unknown

COG id: COG3870

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010375
- InterPro:   IPR011322 [H]

Pfam domain/function: PF06153 DUF970 [H]

EC number: NA

Molecular weight: Translated: 11563; Mature: 11563

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISII
CEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEECCCHHHHHHHHHHH
KDICQTRKGVVSSSASVSEPGGVYIPYPMEVQVGGATIFVVDVDKFIKI
HHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEECCEEEEEEEHHHHHCC
>Mature Secondary Structure
MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISII
CEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEECCCHHHHHHHHHHH
KDICQTRKGVVSSSASVSEPGGVYIPYPMEVQVGGATIFVVDVDKFIKI
HHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEECCEEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]