| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yaaT [H]
Identifier: 18311430
GI number: 18311430
Start: 2795795
End: 2796700
Strand: Reverse
Name: yaaT [H]
Synonym: CPE2448
Alternate gene names: 18311430
Gene position: 2796700-2795795 (Counterclockwise)
Preceding gene: 18311431
Following gene: 18311429
Centisome position: 92.26
GC content: 30.35
Gene sequence:
>906_bases ATGATAGAAGTAATAGGAGTCAGATTTAAAAAAGCTGGTAAAATATATTACTTTGGTCCTAATGGTATAGAGATAAAGAA GGGTCAAAACGTAATTGTTGAAACTGCTAGAGGTATTGAATTTGGAGAATGTGTAATTGGTATAAGAAAAATTAGTGAAG AGGATATCGTTGCACCATTAAAATCTGTATTAAGATTAGCTACAGAGGAAGATATAAATAAGCATAAGGAGAATAAAGCT AAAGAGACAGAGGCTTTTGAAATATGCTTAAAGAAGATAGAAGAACATAATTTAGTAATGAAACTAATAGATGTAGAATA TACATTTGATAATAATAAGGTTATATTCTACTTTACTGCAGAGGGTAGAGTTGACTTTAGAGAATTAGTAAAAGATTTAG CAACTATATTTAAGACAAGAATAGAGCTTAGACAAATAGGGGTTAGAGATGAGGCTAAAATGATAGGTGGACTTGGACCA TGTGGAAGACCTCTTTGTTGCTCTACATTCTTAGGAGACTTTGCTTCAGTTTCAATAAAAATGGCTAAGGAACAAAGTTT ATCACTAAATCCAACTAAGATATCAGGAATATGTGGAAGACTTATGTGTTGTTTAAATTATGAGCAAAGCACATATGAAG AAATAAGAAAAGAACTTCCTAGAGTAGGATCTGTAGTTGAGACTGAACTTGGAAAAGGTGAAGTAGTAGGTAACAACGTA TTAAAGGAATTAGTAAGAGTTAAATTACCAAGAAAAAATGAAGAGATTATACAGGATTTTAAAATGTATGATGTAAAATT AATCTCAGGTAGCTATGAAGGTGAAGTAGAGGATACAAACATTAGATTAGAAATTACTGATGAAGCGGATAAAGCATTAA TTAAAAATCTAATAAAAGATAATTAA
Upstream 100 bases:
>100_bases TAATAAAAGTAGTTAATGAGGCCAGAAATAATTTAAAAAGTAATACTAATTTATGGCTAACTTTAGATAGTATGCTGATT AGTATATTGGAGGAATAAAA
Downstream 100 bases:
>100_bases AATTAAATTTTTAATACGGTATAGGGGTATTCTTTAGCATGTTAATTCTAATTTTACTAGAATAGGCTAAATATGCTTAA AAGAGATATTAAATACTTTA
Product: PSP1 domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPLKSVLRLATEEDINKHKENKA KETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTAEGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGP CGRPLCCSTFLGDFASVSIKMAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKDN
Sequences:
>Translated_301_residues MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPLKSVLRLATEEDINKHKENKA KETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTAEGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGP CGRPLCCSTFLGDFASVSIKMAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKDN >Mature_301_residues MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPLKSVLRLATEEDINKHKENKA KETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTAEGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGP CGRPLCCSTFLGDFASVSIKMAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKDN
Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]
COG id: COG1774
COG function: function code S; Uncharacterized homolog of PSP1
Gene ontology:
Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PSP1 C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007557 [H]
Pfam domain/function: PF04468 PSP1 [H]
EC number: NA
Molecular weight: Translated: 34052; Mature: 34052
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPL CEEEEEEEEECCCEEEEECCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH KSVLRLATEEDINKHKENKAKETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEC EGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGPCGRPLCCSTFLGDFASVSIK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHEEEE MAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEEHHHH LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKD HHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCCCCEECCEEEEEECCHHHHHHHHHHHCC N C >Mature Secondary Structure MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPL CEEEEEEEEECCCEEEEECCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH KSVLRLATEEDINKHKENKAKETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEC EGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGPCGRPLCCSTFLGDFASVSIK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHEEEE MAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEEHHHH LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKD HHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCCCCEECCEEEEEECCHHHHHHHHHHHCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]