Click here to switch to the map view.

The map label for this gene is yacP [H]

Identifier: 18311405

GI number: 18311405

Start: 2771477

End: 2771986

Strand: Reverse

Name: yacP [H]

Synonym: CPE2423

Alternate gene names: 18311405

Gene position: 2771986-2771477 (Counterclockwise)

Preceding gene: 18311406

Following gene: 18311404

Centisome position: 91.44

GC content: 29.02

Gene sequence:

>510_bases
ATGAGAGTTATATTTATAGATGGTTATAATGTTATAAATAGTTGGCCTAATCTAAAAAAGTCAAAAAATTATAGCTATGA
TATAGCAAGAACAGAGCTTACAGAAATGCTTGAAAATTATGCTGCTTTTAACTCTTGTAAAATTTATTTAGTTTTTGATG
CTCATAAGGTTGCTGGAAATATTGAAAGCAAAGAGTTATCTGGAAATATAATTACTGTCTTTACAAAAGAAGGCGAAATT
GCTGATGCATATATTGAGAGAATGGTAGATGAACTAGGAAGAAAAGTAGAAATTGTTGTTGTAACCTCGGATAGGTTAGA
ACAACAAACTATTTTCCAAAGAGGGGCCGTGAGAATGTCATCTATTGAATTCTACAATGAAGTGTTAAAAGTTCAGGATA
ACATTAGAAAAAAGGCAGAAAAAAATAAATTAGAATTAGGTAAAAATTTTTTAGGCGATACTTTAGAAGAAAGTGTATTA
GAAAAATTAGAAAAAATGAGAAGAGGGTAA

Upstream 100 bases:

>100_bases
GGTTGGAAAAATAAATTCTTTAAATGCCTCAGTTGCAGGTGGTATAATGATGTATGAGGTATTAAAATCAAGAATAATAA
AGTAGAAAAAGAGTGATGAG

Downstream 100 bases:

>100_bases
TATTGACGAAGTCATATATAAACCTTATAATTTATTTGTAATTTATTGGATATTAGATTTTTATCTGGGGGTGTAGAGAA
TATGGGGATTACTTATGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRVIFIDGYNVINSWPNLKKSKNYSYDIARTELTEMLENYAAFNSCKIYLVFDAHKVAGNIESKELSGNIITVFTKEGEI
ADAYIERMVDELGRKVEIVVVTSDRLEQQTIFQRGAVRMSSIEFYNEVLKVQDNIRKKAEKNKLELGKNFLGDTLEESVL
EKLEKMRRG

Sequences:

>Translated_169_residues
MRVIFIDGYNVINSWPNLKKSKNYSYDIARTELTEMLENYAAFNSCKIYLVFDAHKVAGNIESKELSGNIITVFTKEGEI
ADAYIERMVDELGRKVEIVVVTSDRLEQQTIFQRGAVRMSSIEFYNEVLKVQDNIRKKAEKNKLELGKNFLGDTLEESVL
EKLEKMRRG
>Mature_169_residues
MRVIFIDGYNVINSWPNLKKSKNYSYDIARTELTEMLENYAAFNSCKIYLVFDAHKVAGNIESKELSGNIITVFTKEGEI
ADAYIERMVDELGRKVEIVVVTSDRLEQQTIFQRGAVRMSSIEFYNEVLKVQDNIRKKAEKNKLELGKNFLGDTLEESVL
EKLEKMRRG

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 19527; Mature: 19527

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIFIDGYNVINSWPNLKKSKNYSYDIARTELTEMLENYAAFNSCKIYLVFDAHKVAGN
CEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHCC
IESKELSGNIITVFTKEGEIADAYIERMVDELGRKVEIVVVTSDRLEQQTIFQRGAVRMS
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHCCHHHH
SIEFYNEVLKVQDNIRKKAEKNKLELGKNFLGDTLEESVLEKLEKMRRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVIFIDGYNVINSWPNLKKSKNYSYDIARTELTEMLENYAAFNSCKIYLVFDAHKVAGN
CEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHCC
IESKELSGNIITVFTKEGEIADAYIERMVDELGRKVEIVVVTSDRLEQQTIFQRGAVRMS
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHCCHHHH
SIEFYNEVLKVQDNIRKKAEKNKLELGKNFLGDTLEESVLEKLEKMRRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]