| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311232
Identifier: 18311232
GI number: 18311232
Start: 2581458
End: 2582162
Strand: Direct
Name: 18311232
Synonym: CPE2250
Alternate gene names: NA
Gene position: 2581458-2582162 (Clockwise)
Preceding gene: 18311227
Following gene: 18311237
Centisome position: 85.16
GC content: 24.11
Gene sequence:
>705_bases GTGAAAAAGTTACTTGTACCAGTTTTAGTTATTATAATTTTTGCATTGCTATTTGTAGGATGTACAAATTCTTCTAATTC ATCAAGTGATTCTTCTGTAGAAATAATAAATAGTAATCAGCAAAATTCTAATTCCAATAATAATAACAGTTCTAATAATG ACGCTAAAAAATCTGACTCTAACAATGCTTCACATAAAGATAAAAATGTTTCCAATAATAAAAATACTAATAAAAAATTA GATAATAAAACCGAAAAATTATTAAAAGATATTAAAGAAAAAGCTTTAAAAGGTGAAATTATTGACTATGATTTTAAACT AGGTGATTCAATATATGATGTAATTGACAAATTAGGAAAACCTTCTAGTGAAAATTATGTTGCTGAAGCTAAAGGAAATT ACTTTAATTTTGATTCCTATAATTTATCATTTGGATGTAATAAGGGTGATCAAATCTTTGAAATTAGATCTTTAAATAAG GATTTAAAAAGCTTAGATTTAAATAATGTAGAAAACTTTTTTGGAAAGCCTGATTATACTGTTACAACTAAATCAAAAGA AAAAATTATTGGATATAAAATAACAAAAGATTTTAAAATACTATTTGTATTCAATACTAGTACATATAAATTAGACCATT ATTCTGTTCTATATCCAGGCATAACTCATAATTCTATGGCAGGAGATAACGGCAGAGAGTGGTAA
Upstream 100 bases:
>100_bases TAAAAGGCTTAAATTTTATTAATTAATAAATTTGTTAACTTTTTGTAAACAAAATATATATAATTTAATTAATTTTAAAA ATATAATAGGAGTGATTAAA
Downstream 100 bases:
>100_bases TATAATTACACTTAAAGAAAAAGAGGTTATATACAATCTAATAATAAACCTTAAAAACATATTTTCGCACTTACTTTCTA TAAGTTTTATTAAAAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKKLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDAKKSDSNNASHKDKNVSNNKNTNKKL DNKTEKLLKDIKEKALKGEIIDYDFKLGDSIYDVIDKLGKPSSENYVAEAKGNYFNFDSYNLSFGCNKGDQIFEIRSLNK DLKSLDLNNVENFFGKPDYTVTTKSKEKIIGYKITKDFKILFVFNTSTYKLDHYSVLYPGITHNSMAGDNGREW
Sequences:
>Translated_234_residues MKKLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDAKKSDSNNASHKDKNVSNNKNTNKKL DNKTEKLLKDIKEKALKGEIIDYDFKLGDSIYDVIDKLGKPSSENYVAEAKGNYFNFDSYNLSFGCNKGDQIFEIRSLNK DLKSLDLNNVENFFGKPDYTVTTKSKEKIIGYKITKDFKILFVFNTSTYKLDHYSVLYPGITHNSMAGDNGREW >Mature_234_residues MKKLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDAKKSDSNNASHKDKNVSNNKNTNKKL DNKTEKLLKDIKEKALKGEIIDYDFKLGDSIYDVIDKLGKPSSENYVAEAKGNYFNFDSYNLSFGCNKGDQIFEIRSLNK DLKSLDLNNVENFFGKPDYTVTTKSKEKIIGYKITKDFKILFVFNTSTYKLDHYSVLYPGITHNSMAGDNGREW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26350; Mature: 26350
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDAKKSDS CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC NNASHKDKNVSNNKNTNKKLDNKTEKLLKDIKEKALKGEIIDYDFKLGDSIYDVIDKLGK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHCCCHHHHHHHHHCC PSSENYVAEAKGNYFNFDSYNLSFGCNKGDQIFEIRSLNKDLKSLDLNNVENFFGKPDYT CCCCCEEEECCCCEECCCCCEEEECCCCCCCEEEHHHHHHHHHHCCCHHHHHHCCCCCEE VTTKSKEKIIGYKITKDFKILFVFNTSTYKLDHYSVLYPGITHNSMAGDNGREW EEECCCCCEEEEEECCCEEEEEEECCCEEEECCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKKLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDAKKSDS CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC NNASHKDKNVSNNKNTNKKLDNKTEKLLKDIKEKALKGEIIDYDFKLGDSIYDVIDKLGK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHCCCHHHHHHHHHCC PSSENYVAEAKGNYFNFDSYNLSFGCNKGDQIFEIRSLNKDLKSLDLNNVENFFGKPDYT CCCCCEEEECCCCEECCCCCEEEECCCCCCCEEEHHHHHHHHHHCCCHHHHHHCCCCCEE VTTKSKEKIIGYKITKDFKILFVFNTSTYKLDHYSVLYPGITHNSMAGDNGREW EEECCCCCEEEEEECCCEEEEEEECCCEEEECCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA