Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311237

Identifier: 18311237

GI number: 18311237

Start: 2588068

End: 2589771

Strand: Direct

Name: 18311237

Synonym: CPE2255

Alternate gene names: NA

Gene position: 2588068-2589771 (Clockwise)

Preceding gene: 18311232

Following gene: 18311240

Centisome position: 85.37

GC content: 25.29

Gene sequence:

>1704_bases
TTGAAGTATATAGGTTCATTCTTCAAAGCTAATTCTCTTTCTAAAGAAGAGATAGCATCACAATTACTTTTTCTTTCAAA
AGAATCAGTAAATCATATAGTACTTGAATCTAGGTGTGGAATATCTACAAATTACAAAAATCTTAAAGAAAATTTTAAAA
AAGATGAGATATCATTCTTTAAAAATAATACTCCATTAATTTGTATATATAAAAAAGCAAAGCCTAATATTTACTCTTCT
AAGTATTCAAAAACTTGGGATGATACCACCTTTAAAAAAGATATTCCAGTTTCATCTAATGCATTAATGACCCTTTCTCT
TTTAAGACTTTGTTCTTACTATGAGAAATTTAAAAATATTAATAGTGCACTTTATAAAAGAGCTGCCTTTTATAAAAATT
TAAGTAAGCTTCAACTGGAATTTTATTATACCTATTTAAGAAATCCAGAAGGTTTTTTTGTAAATAAGAAAAATGATGAG
TCTTCTTCTAAGTCTGGCTTAAATATAAGTGAAAAAGAAGATGAAATGTCTTACTCAGATCAAGCTTTAATGATGTTAGC
TTACTATATGTATAGTAAAGTAGCTCCTGAAGATTCTGATAGCAAAACCTATGAAGATTTTGCACTTCAAATATTAAACA
TGTTTGTTAATTTTAAAGAAGAATTATACTTACTTTCCTTAGATGAATGTTGCAAAATAGACTATTGCTTAAATAACATG
CTTCTATATTCAAATAATGAAGATTGTAAATTATTAGTTTTAGATTTATCTGATTTCATATTAAACAAATACTATGAATC
AAATAGCACATTTTCTAATCTTGAAACCACTTCTCTACTAGCCTTAAATATGTATTTAAGCTATAAGAACACAAACATAC
TTATATTTAAAGATGCTTACTTAGACTTAATTGAGCTTTTCTGTAATATGTTTAATGATGAAAAGGGAATAATCCTAAAA
GGAACAGATAAAAAAGAGTATAAATATTCTAACATGGAAATATGCTTATATTTAACTAATCTTTTAATGTCCTTTGATTT
AGATGAAGATTCATCAGATAAAAGAGAAAATATAATATCTAAGGTCTATAAAAATTATATAGTTAACTCAGGAATAGTAA
CTAGTTTCCCTGATGCTCCAAATTTAGATTCTCATGAAAGATATAAAAAGTTCTCTTTAAAGCCTGATGATTTAATTGAT
GAATCAATGTTTAGAATGACTAATGCTAATAGCCCTGAACTTACAGGACTGGCACCTATATTTACAAAAAATCTAAAGTA
CTCTACAAAAAAATCAATTTTCACTTCAGATAAAACTACCTTTGATAGTACAAAAAATATGTTTATATTCTTTGTATTTA
TAAATAGTTTTATTGATAAATATATAGATTTTATTACTGATACTCCTAAAGAGAAAAAAAGTGCTATGTTAGTAGAAGAA
ATAGACTCTTTAAAGAATGTACAAAAAATAAATAAACTTCCTAAATTAAATAATTTTAACTCTAAGACTCCTATAGTTCC
ACCTGATGCTGGAGAATCAGACTATAATTCTATAACTAATGAAAATCAAGTTGATGAAATTTCTCCACCACCAACAAACC
CAAACTTAACTAGAGAAATATCTGAATATAATGATTCTTCAATAGATAAAAAAGAGGATTTAGATGATAAAATGAAAAAT
ATTCTTGATTCTACTGATTTATAA

Upstream 100 bases:

>100_bases
ACCTTTATTTCACCTAAAAGTATTATGTACTCACTAGGTAATATTTATAATAAAAATTCATATTAATATATATAAGAAAT
AATATCATGAGGTGAATTAT

Downstream 100 bases:

>100_bases
TAATTTATGCTTCATAAAACAATTAAAAACTTATAAATAGCTTTCTAGGAATTTCTATACTCTTTCTTTTCCTAATGTGC
TATTTATAAGTTTTATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MKYIGSFFKANSLSKEEIASQLLFLSKESVNHIVLESRCGISTNYKNLKENFKKDEISFFKNNTPLICIYKKAKPNIYSS
KYSKTWDDTTFKKDIPVSSNALMTLSLLRLCSYYEKFKNINSALYKRAAFYKNLSKLQLEFYYTYLRNPEGFFVNKKNDE
SSSKSGLNISEKEDEMSYSDQALMMLAYYMYSKVAPEDSDSKTYEDFALQILNMFVNFKEELYLLSLDECCKIDYCLNNM
LLYSNNEDCKLLVLDLSDFILNKYYESNSTFSNLETTSLLALNMYLSYKNTNILIFKDAYLDLIELFCNMFNDEKGIILK
GTDKKEYKYSNMEICLYLTNLLMSFDLDEDSSDKRENIISKVYKNYIVNSGIVTSFPDAPNLDSHERYKKFSLKPDDLID
ESMFRMTNANSPELTGLAPIFTKNLKYSTKKSIFTSDKTTFDSTKNMFIFFVFINSFIDKYIDFITDTPKEKKSAMLVEE
IDSLKNVQKINKLPKLNNFNSKTPIVPPDAGESDYNSITNENQVDEISPPPTNPNLTREISEYNDSSIDKKEDLDDKMKN
ILDSTDL

Sequences:

>Translated_567_residues
MKYIGSFFKANSLSKEEIASQLLFLSKESVNHIVLESRCGISTNYKNLKENFKKDEISFFKNNTPLICIYKKAKPNIYSS
KYSKTWDDTTFKKDIPVSSNALMTLSLLRLCSYYEKFKNINSALYKRAAFYKNLSKLQLEFYYTYLRNPEGFFVNKKNDE
SSSKSGLNISEKEDEMSYSDQALMMLAYYMYSKVAPEDSDSKTYEDFALQILNMFVNFKEELYLLSLDECCKIDYCLNNM
LLYSNNEDCKLLVLDLSDFILNKYYESNSTFSNLETTSLLALNMYLSYKNTNILIFKDAYLDLIELFCNMFNDEKGIILK
GTDKKEYKYSNMEICLYLTNLLMSFDLDEDSSDKRENIISKVYKNYIVNSGIVTSFPDAPNLDSHERYKKFSLKPDDLID
ESMFRMTNANSPELTGLAPIFTKNLKYSTKKSIFTSDKTTFDSTKNMFIFFVFINSFIDKYIDFITDTPKEKKSAMLVEE
IDSLKNVQKINKLPKLNNFNSKTPIVPPDAGESDYNSITNENQVDEISPPPTNPNLTREISEYNDSSIDKKEDLDDKMKN
ILDSTDL
>Mature_567_residues
MKYIGSFFKANSLSKEEIASQLLFLSKESVNHIVLESRCGISTNYKNLKENFKKDEISFFKNNTPLICIYKKAKPNIYSS
KYSKTWDDTTFKKDIPVSSNALMTLSLLRLCSYYEKFKNINSALYKRAAFYKNLSKLQLEFYYTYLRNPEGFFVNKKNDE
SSSKSGLNISEKEDEMSYSDQALMMLAYYMYSKVAPEDSDSKTYEDFALQILNMFVNFKEELYLLSLDECCKIDYCLNNM
LLYSNNEDCKLLVLDLSDFILNKYYESNSTFSNLETTSLLALNMYLSYKNTNILIFKDAYLDLIELFCNMFNDEKGIILK
GTDKKEYKYSNMEICLYLTNLLMSFDLDEDSSDKRENIISKVYKNYIVNSGIVTSFPDAPNLDSHERYKKFSLKPDDLID
ESMFRMTNANSPELTGLAPIFTKNLKYSTKKSIFTSDKTTFDSTKNMFIFFVFINSFIDKYIDFITDTPKEKKSAMLVEE
IDSLKNVQKINKLPKLNNFNSKTPIVPPDAGESDYNSITNENQVDEISPPPTNPNLTREISEYNDSSIDKKEDLDDKMKN
ILDSTDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65805; Mature: 65805

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIGSFFKANSLSKEEIASQLLFLSKESVNHIVLESRCGISTNYKNLKENFKKDEISFF
CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCHHHHHHC
KNNTPLICIYKKAKPNIYSSKYSKTWDDTTFKKDIPVSSNALMTLSLLRLCSYYEKFKNI
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSALYKRAAFYKNLSKLQLEFYYTYLRNPEGFFVNKKNDESSSKSGLNISEKEDEMSYSD
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCH
QALMMLAYYMYSKVAPEDSDSKTYEDFALQILNMFVNFKEELYLLSLDECCKIDYCLNNM
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCE
LLYSNNEDCKLLVLDLSDFILNKYYESNSTFSNLETTSLLALNMYLSYKNTNILIFKDAY
EEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHEEEEEEEEEECCCEEEEEEHHH
LDLIELFCNMFNDEKGIILKGTDKKEYKYSNMEICLYLTNLLMSFDLDEDSSDKRENIIS
HHHHHHHHHHHCCCCCEEEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KVYKNYIVNSGIVTSFPDAPNLDSHERYKKFSLKPDDLIDESMFRMTNANSPELTGLAPI
HHHHHHHHCCCCEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
FTKNLKYSTKKSIFTSDKTTFDSTKNMFIFFVFINSFIDKYIDFITDTPKEKKSAMLVEE
HHCCCCCCHHHCEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IDSLKNVQKINKLPKLNNFNSKTPIVPPDAGESDYNSITNENQVDEISPPPTNPNLTREI
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHH
SEYNDSSIDKKEDLDDKMKNILDSTDL
HHCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYIGSFFKANSLSKEEIASQLLFLSKESVNHIVLESRCGISTNYKNLKENFKKDEISFF
CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCHHHHHHC
KNNTPLICIYKKAKPNIYSSKYSKTWDDTTFKKDIPVSSNALMTLSLLRLCSYYEKFKNI
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSALYKRAAFYKNLSKLQLEFYYTYLRNPEGFFVNKKNDESSSKSGLNISEKEDEMSYSD
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCH
QALMMLAYYMYSKVAPEDSDSKTYEDFALQILNMFVNFKEELYLLSLDECCKIDYCLNNM
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCE
LLYSNNEDCKLLVLDLSDFILNKYYESNSTFSNLETTSLLALNMYLSYKNTNILIFKDAY
EEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHEEEEEEEEEECCCEEEEEEHHH
LDLIELFCNMFNDEKGIILKGTDKKEYKYSNMEICLYLTNLLMSFDLDEDSSDKRENIIS
HHHHHHHHHHHCCCCCEEEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KVYKNYIVNSGIVTSFPDAPNLDSHERYKKFSLKPDDLIDESMFRMTNANSPELTGLAPI
HHHHHHHHCCCCEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
FTKNLKYSTKKSIFTSDKTTFDSTKNMFIFFVFINSFIDKYIDFITDTPKEKKSAMLVEE
HHCCCCCCHHHCEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IDSLKNVQKINKLPKLNNFNSKTPIVPPDAGESDYNSITNENQVDEISPPPTNPNLTREI
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHH
SEYNDSSIDKKEDLDDKMKNILDSTDL
HHCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA