Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311156

Identifier: 18311156

GI number: 18311156

Start: 2493927

End: 2494889

Strand: Reverse

Name: 18311156

Synonym: CPE2174

Alternate gene names: NA

Gene position: 2494889-2493927 (Counterclockwise)

Preceding gene: 18311157

Following gene: 18311155

Centisome position: 82.3

GC content: 23.05

Gene sequence:

>963_bases
GTGAGCTTATATGGCAATGATTTAAGGGTTGAGAATAGATATAATCATATATTAAAGAAATGGTATGTAAAAAGCAATGA
TAGGTTTATAAATTTAATATGTGAGCCTTATCAAAAGTTGAACTTTATTGAAAGTTTAATTAGTGATTGTTTAATAAATA
ATGAAAAAGTTTTGTATGTAGGTAAGAGTAGAAAAGTTTGTAAGAATGAGCAATTAAATTCTATGAATTTTGATTTTATA
AATTTTAATAATATTTTTAATATAAAAAAGAATTTTGATTTAATAATATATGATGATGTAAGTTTATATTCAAATAAGAG
TAGTATTGAATGCAATGAGGATTTAATGTACTTAAAACGCCTATCTAAGAAAATAGTAATATGTTCAGTAGATAAGGTAT
TTAATAATATAAAGCACATAGAAATATTAAATAATCAAAGAAAAACACATTTCTTAGAGCCAAGATTAATAACAACTAGA
GTTAATTTAGAAAATTCAATGCCTTATACCTTATATGATTATATTGAATGGTTTATAAGAGAAAAGAGAATCTTGGTTGT
ATATGTTCCAAATAAATTTAACTTAAATAAAATTTATGAATATTATACTGAGGATTTAAATTTAGAAAATAAGGTTAAAA
TAGTAAAAGAAGATAAAAAGAATTCCTTTTTAAATATAGTAAATGAAAGTAGATTTAAAAAAGAAGGGATTATTTTTATA
ACAGATTCATTACATGAATATTTTGATTCTATTCCAGAATGTGATATGGTGATATATTCTTTTGAAAAAGATATTGTTGA
TTACAAAAAAATAATATTTGCCTGTGGAGCTTTATGTAAAGATAAATTCACTGGAAGAGAAGTAATATTATTAAGTAATG
AAGAGGGAGATAACATAGAAACTGCTAGGAGGTTAGCAAGAGGCTTTAATAAAACTTTATGGAGAGAGTCAGAGATAAGG
TAG

Upstream 100 bases:

>100_bases
ATACAAGGAGTATGGAGCGTTATTCCTCTTTAAATTGGAGAATAAAAGAAGTAATATCTAATGAGGTTTTTGAACAAGAT
TAAATTAGGGGGATTTAAAA

Downstream 100 bases:

>100_bases
ATTATTTATTTCAATGTTTTTTAGAAGCTATTTATCCAACAGAAGAAAAGTGTTATGTATGCAATACAGAAGGAGAAAAA
ATAATTTGTGATAAATGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSLYGNDLRVENRYNHILKKWYVKSNDRFINLICEPYQKLNFIESLISDCLINNEKVLYVGKSRKVCKNEQLNSMNFDFI
NFNNIFNIKKNFDLIIYDDVSLYSNKSSIECNEDLMYLKRLSKKIVICSVDKVFNNIKHIEILNNQRKTHFLEPRLITTR
VNLENSMPYTLYDYIEWFIREKRILVVYVPNKFNLNKIYEYYTEDLNLENKVKIVKEDKKNSFLNIVNESRFKKEGIIFI
TDSLHEYFDSIPECDMVIYSFEKDIVDYKKIIFACGALCKDKFTGREVILLSNEEGDNIETARRLARGFNKTLWRESEIR

Sequences:

>Translated_320_residues
MSLYGNDLRVENRYNHILKKWYVKSNDRFINLICEPYQKLNFIESLISDCLINNEKVLYVGKSRKVCKNEQLNSMNFDFI
NFNNIFNIKKNFDLIIYDDVSLYSNKSSIECNEDLMYLKRLSKKIVICSVDKVFNNIKHIEILNNQRKTHFLEPRLITTR
VNLENSMPYTLYDYIEWFIREKRILVVYVPNKFNLNKIYEYYTEDLNLENKVKIVKEDKKNSFLNIVNESRFKKEGIIFI
TDSLHEYFDSIPECDMVIYSFEKDIVDYKKIIFACGALCKDKFTGREVILLSNEEGDNIETARRLARGFNKTLWRESEIR
>Mature_319_residues
SLYGNDLRVENRYNHILKKWYVKSNDRFINLICEPYQKLNFIESLISDCLINNEKVLYVGKSRKVCKNEQLNSMNFDFIN
FNNIFNIKKNFDLIIYDDVSLYSNKSSIECNEDLMYLKRLSKKIVICSVDKVFNNIKHIEILNNQRKTHFLEPRLITTRV
NLENSMPYTLYDYIEWFIREKRILVVYVPNKFNLNKIYEYYTEDLNLENKVKIVKEDKKNSFLNIVNESRFKKEGIIFIT
DSLHEYFDSIPECDMVIYSFEKDIVDYKKIIFACGALCKDKFTGREVILLSNEEGDNIETARRLARGFNKTLWRESEIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38336; Mature: 38204

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYGNDLRVENRYNHILKKWYVKSNDRFINLICEPYQKLNFIESLISDCLINNEKVLYV
CCCCCCCEEECHHHHHHHHHHEECCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEE
GKSRKVCKNEQLNSMNFDFINFNNIFNIKKNFDLIIYDDVSLYSNKSSIECNEDLMYLKR
CCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEECCCEECCCCCCCCCHHHHHHHH
LSKKIVICSVDKVFNNIKHIEILNNQRKTHFLEPRLITTRVNLENSMPYTLYDYIEWFIR
HCCEEEEEEHHHHHCCCEEEEEECCCCCCEECCCEEEEEEEECCCCCCCHHHHHHHHHHC
EKRILVVYVPNKFNLNKIYEYYTEDLNLENKVKIVKEDKKNSFLNIVNESRFKKEGIIFI
CCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEE
TDSLHEYFDSIPECDMVIYSFEKDIVDYKKIIFACGALCKDKFTGREVILLSNEEGDNIE
ECCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH
TARRLARGFNKTLWRESEIR
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLYGNDLRVENRYNHILKKWYVKSNDRFINLICEPYQKLNFIESLISDCLINNEKVLYV
CCCCCCEEECHHHHHHHHHHEECCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEE
GKSRKVCKNEQLNSMNFDFINFNNIFNIKKNFDLIIYDDVSLYSNKSSIECNEDLMYLKR
CCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEECCCEECCCCCCCCCHHHHHHHH
LSKKIVICSVDKVFNNIKHIEILNNQRKTHFLEPRLITTRVNLENSMPYTLYDYIEWFIR
HCCEEEEEEHHHHHCCCEEEEEECCCCCCEECCCEEEEEEEECCCCCCCHHHHHHHHHHC
EKRILVVYVPNKFNLNKIYEYYTEDLNLENKVKIVKEDKKNSFLNIVNESRFKKEGIIFI
CCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEE
TDSLHEYFDSIPECDMVIYSFEKDIVDYKKIIFACGALCKDKFTGREVILLSNEEGDNIE
ECCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH
TARRLARGFNKTLWRESEIR
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA