| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311145
Identifier: 18311145
GI number: 18311145
Start: 2480759
End: 2481379
Strand: Reverse
Name: 18311145
Synonym: CPE2163
Alternate gene names: NA
Gene position: 2481379-2480759 (Counterclockwise)
Preceding gene: 18311149
Following gene: 18311144
Centisome position: 81.86
GC content: 28.02
Gene sequence:
>621_bases ATGTTAGTAAAAGCTATTATGACAAAGAAAGAAAATCTAGATTTAGTTGATTCTAATACTAAACTTAAAGATGCACTAAA AATCATGGAGGATAATAAGTTTTTATCAATTCCTGTAGTAGATGGAGATAAGTTTAGGGGCGCAGTGGCTAAAAGCTCTA TCTATAAATATTACTTTAAACATAATTTAAGCAAAGATGAAGTATTAAATAATATTACTGTAGGTGAGATATTAAAAACA GAGGTTCCTATAATAAATAAATCAGAACATATAGAAAAGGCAGTATCCATGCTAGAAAGAATGAGAATTTCTTTTGTGGC TGTTGTGGATGAATTTGATAATTTCAAAGGAATACTAACTCATAAGGCAGTTTTTAGAGAATTTAACAATGCTTTTGGAC TTAATAAAGGGGAAAGAATAGTAATAAGATCTTATGATGTCCCAGGACAATTATCAAAAATAACTAAGACAATATCTGAA GAAGGTGGAGATATATTAAGCATAGTTATTGTAGATACAAAGAGTTTAACTGATGTTAAAGAGGTTATAGTTAGGGTTAA AAGCATAGATGTTGAAAATATTAAAAAGAAATTAAAAGAGTCAGGATTTAAATTAGCATAG
Upstream 100 bases:
>100_bases TAATACTTTGATAAATTTAATATAATTGGATAACTATGTAATAATATAATAGTATAATAATAGTATATAGTATGTAAATT TAGGAATTGGGGGGATTTGT
Downstream 100 bases:
>100_bases TAAACTATTATAAACACATAAGTATAGAGCATATATAATATTGATTTTTTAAATTTATATTATATATGCTTTATTTTAAT TGATGAAGATAATAGTGAAA
Product: CBS domain protein
Products: NA
Alternate protein names: CBS Domain Containing Protein; CBS Domain Protein; Cbs Domain Containing Membrane Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFKHNLSKDEVLNNITVGEILKT EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISE EGGDILSIVIVDTKSLTDVKEVIVRVKSIDVENIKKKLKESGFKLA
Sequences:
>Translated_206_residues MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFKHNLSKDEVLNNITVGEILKT EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISE EGGDILSIVIVDTKSLTDVKEVIVRVKSIDVENIKKKLKESGFKLA >Mature_206_residues MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFKHNLSKDEVLNNITVGEILKT EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISE EGGDILSIVIVDTKSLTDVKEVIVRVKSIDVENIKKKLKESGFKLA
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23265; Mature: 23265
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFK CCHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH HNLSKDEVLNNITVGEILKTEVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILT CCCCHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISEEGGDILSIVIVDTKSLTDVK HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH EVIVRVKSIDVENIKKKLKESGFKLA HHHHHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFK CCHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH HNLSKDEVLNNITVGEILKTEVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILT CCCCHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISEEGGDILSIVIVDTKSLTDVK HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH EVIVRVKSIDVENIKKKLKESGFKLA HHHHHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA