Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is znuA [C]

Identifier: 18311140

GI number: 18311140

Start: 2472360

End: 2473256

Strand: Reverse

Name: znuA [C]

Synonym: CPE2158

Alternate gene names: 18311140

Gene position: 2473256-2472360 (Counterclockwise)

Preceding gene: 18311141

Following gene: 18311139

Centisome position: 81.59

GC content: 29.88

Gene sequence:

>897_bases
ATGAGAAAGAAATTAGTATCGATTTTTTTAGGAGTAACAATGGCTGCTTTTTTTGTTGGGTGTCAAAGTACTAAAACAGC
AGAAAATAAAAAGGATAACGGTAAGGTTGATGTCACTGTAAGTATTGAACCTTTAAGAGAGTTTACTGAAATAGTTGGTG
GAGATAAGGTAAATGTTAAGACTATGGTTCCAAATGGAACAGAGCCACATGATTTTGAACCAAAAACTCAAGATTTATTA
GAGTTAAATAAGGCTAAGGTTTTTGTTTATAATGGATTAGGTATGGAACACTGGAAAGAGCAAGTTCTTAATACAATAGA
AAATAAAGATGTAAAAGTGGTTGAAGCTTCTAAAGGGGCTGAAGTATTAAAAGAAGGAGATAAGGTAGATCCTCATCTTT
GGTTAAGCTTAGATGGAGCTAAAATAGAAGCTCAAAACATAAAAGATGCTTTAGTTGAGGTTGATTCAGATAATAAAAGT
TATTACGAAGAAAACTTTAAAAAGTTTGCAGAGAAATTAGATTCTTTAGCAAATGAGTACAAAGAAAAGTTTAATGGATT
AGCTAATAAGGATTTTGTTACTGGTCATGCTGCTTTTGGATACTTATGTAGAGAATTTGGATTAAAACAAGTTAGTGTAG
AAAACTTATTTGGAGAAGGAGAAATAACTCCTCAAAAAATGCAAGAGATAGTTGAGTTCTGTAAGAAAAATGATATAAAA
ACAATTTTTATGCCTGAGTTAGCAAGTGAAAAAATTTCTCAAACTTTAGCTAATGAAGTTGGTGGAAAAATTGAAAAAAT
ATATACTCTAGAAAGCAATGAAGATGGTATAAGTTATATAGATGCTATGAAAGAAAATCTTTCAAAAATATATAATGCCT
TATCATCACAAAAATAA

Upstream 100 bases:

>100_bases
TTATTTTTATGATAGTTTTATTATAAATATTGACAATAATAGAAAAGTAATATAAAGTTTATATTATAATAATGCGAATC
ATTTGCAAACAGGAGGAAGT

Downstream 100 bases:

>100_bases
AAGAGAATACTTAGGATTGTTACTTAATTAGAAGGCAAGACTTAGATTTATTATTCTAATACCTATTAATAATAAAATAG
GTGTTTTATAGGAATAATAA

Product: ABC transporter substrate-binding protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVKTMVPNGTEPHDFEPKTQDLL
ELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGAEVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKS
YYEENFKKFAEKLDSLANEYKEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK
TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK

Sequences:

>Translated_298_residues
MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVKTMVPNGTEPHDFEPKTQDLL
ELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGAEVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKS
YYEENFKKFAEKLDSLANEYKEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK
TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK
>Mature_298_residues
MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVKTMVPNGTEPHDFEPKTQDLL
ELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGAEVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKS
YYEENFKKFAEKLDSLANEYKEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK
TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK

Specific function: Part of an ATP-driven transport system TP_0034/TP_0035/TP_0036 for a metal. Metal-binding component [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

Organism=Escherichia coli, GI87081990, Length=215, Percent_Identity=23.7209302325581, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 33457; Mature: 33457

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCEEEE
TMVPNGTEPHDFEPKTQDLLELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGA
EECCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCH
EVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKSYYEENFKKFAEKLDSLANEY
HHHHCCCCCCCEEEEEECCCEEEHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHH
KEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK
HHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK
EEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCEEEE
TMVPNGTEPHDFEPKTQDLLELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGA
EECCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCH
EVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKSYYEENFKKFAEKLDSLANEY
HHHHCCCCCCCEEEEEECCCEEEHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHH
KEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK
HHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK
EEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]