| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is prmA [H]
Identifier: 18311085
GI number: 18311085
Start: 2411804
End: 2412664
Strand: Direct
Name: prmA [H]
Synonym: CPE2103
Alternate gene names: 18311085
Gene position: 2411804-2412664 (Clockwise)
Preceding gene: 18311076
Following gene: 18311092
Centisome position: 79.56
GC content: 28.46
Gene sequence:
>861_bases ATGTTTATAATTACTTATAAAATGCCAAAGGAACTTGTTGATGAAAAAATAGAATTACTTCAAATCAATGATATATTCAA TGTTTATTATGAGTCCCCACTAGACATAACAACAGATATGTTTGGATATGGCTATAAAGAAAAGGAAAATGTTATTGTTG ATTTAAAAGTAGCCTTTGATGGTAATCTAGAAGACTTTGAAAACTTTAAATCTCAAGTTTCTTCATTACTTAAAGAAACT CCTTCTTCAATAGATGAAGTTAAAAATGAATTTGAAGAATTTTATATTGACCCAATTCATTTAAATGATCAATGGGTTTT ATGTGCCCCAACTGATAACTTTGAAAATAAAAAAGAAATTTTCTTTACTCCTCAAGGTGCCTTTGGAACTGGATTACATG AAACTACTCAAGATATATTAAAATTCATAGTTGAAGAAGATTTTGAAGGAAAATCTCTTCTTGATTTAGGAACAGGTTCT GGAATACTTTCTATAGCTGCTGGAGTAAAAGGTGCTTCAAAAATAGTAGCAGTAGATATAAGAGATGTGGAAGATGAAGT TCTTTTAAATGCTTCTTTAAATGAACTAGAAAATATAGACGTAGTAGTTGGAAATGTTCTTCATGAAGATTATAAATTAG ATGAAAAATTTGATTGGATATTTATAAATATTGGAGGAGAAGAAACTGCAATGTTTATGGATTTTATTGAAGAACACATA GAAAAGACTGGAAAGCTTCTAGTTTCAGGCTTAGTTGAATGGAGCTTTGATTGGGTTAAAGAAAAGGTTGAGAATAAAGG CTTTAAATTAAATAAAAAATTCCAAACAAATGAATGGTGTACTGCAATATTCTCAAAATAA
Upstream 100 bases:
>100_bases ATTTTATAGAAAGCTTAATCTTAAATAAAACTCCTCACTAATTTTAATATGCTATAATCTTCTTATACATAATTAAAACT TAATATAAGGAGATACATAT
Downstream 100 bases:
>100_bases AATAACTAAACTTAAGGAAATTAGATAATCTTTTCTTTTACAGAAAATTATCTACTATCTTACTTTATATTGGGCGTGTA TCCAAATAACTTTTAATAAA
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MFIITYKMPKELVDEKIELLQINDIFNVYYESPLDITTDMFGYGYKEKENVIVDLKVAFDGNLEDFENFKSQVSSLLKET PSSIDEVKNEFEEFYIDPIHLNDQWVLCAPTDNFENKKEIFFTPQGAFGTGLHETTQDILKFIVEEDFEGKSLLDLGTGS GILSIAAGVKGASKIVAVDIRDVEDEVLLNASLNELENIDVVVGNVLHEDYKLDEKFDWIFINIGGEETAMFMDFIEEHI EKTGKLLVSGLVEWSFDWVKEKVENKGFKLNKKFQTNEWCTAIFSK
Sequences:
>Translated_286_residues MFIITYKMPKELVDEKIELLQINDIFNVYYESPLDITTDMFGYGYKEKENVIVDLKVAFDGNLEDFENFKSQVSSLLKET PSSIDEVKNEFEEFYIDPIHLNDQWVLCAPTDNFENKKEIFFTPQGAFGTGLHETTQDILKFIVEEDFEGKSLLDLGTGS GILSIAAGVKGASKIVAVDIRDVEDEVLLNASLNELENIDVVVGNVLHEDYKLDEKFDWIFINIGGEETAMFMDFIEEHI EKTGKLLVSGLVEWSFDWVKEKVENKGFKLNKKFQTNEWCTAIFSK >Mature_286_residues MFIITYKMPKELVDEKIELLQINDIFNVYYESPLDITTDMFGYGYKEKENVIVDLKVAFDGNLEDFENFKSQVSSLLKET PSSIDEVKNEFEEFYIDPIHLNDQWVLCAPTDNFENKKEIFFTPQGAFGTGLHETTQDILKFIVEEDFEGKSLLDLGTGS GILSIAAGVKGASKIVAVDIRDVEDEVLLNASLNELENIDVVVGNVLHEDYKLDEKFDWIFINIGGEETAMFMDFIEEHI EKTGKLLVSGLVEWSFDWVKEKVENKGFKLNKKFQTNEWCTAIFSK
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 32768; Mature: 32768
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIITYKMPKELVDEKIELLQINDIFNVYYESPLDITTDMFGYGYKEKENVIVDLKVAFD CEEEEECCCHHHHHHHHHEEEEHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEC GNLEDFENFKSQVSSLLKETPSSIDEVKNEFEEFYIDPIHLNDQWVLCAPTDNFENKKEI CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCEE FFTPQGAFGTGLHETTQDILKFIVEEDFEGKSLLDLGTGSGILSIAAGVKGASKIVAVDI EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCEEEEEEE RDVEDEVLLNASLNELENIDVVVGNVLHEDYKLDEKFDWIFINIGGEETAMFMDFIEEHI ECCCCHHEEECCHHHHCCCHHEEHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH EKTGKLLVSGLVEWSFDWVKEKVENKGFKLNKKFQTNEWCTAIFSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHCCC >Mature Secondary Structure MFIITYKMPKELVDEKIELLQINDIFNVYYESPLDITTDMFGYGYKEKENVIVDLKVAFD CEEEEECCCHHHHHHHHHEEEEHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEC GNLEDFENFKSQVSSLLKETPSSIDEVKNEFEEFYIDPIHLNDQWVLCAPTDNFENKKEI CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCEE FFTPQGAFGTGLHETTQDILKFIVEEDFEGKSLLDLGTGSGILSIAAGVKGASKIVAVDI EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCEEEEEEE RDVEDEVLLNASLNELENIDVVVGNVLHEDYKLDEKFDWIFINIGGEETAMFMDFIEEHI ECCCCHHEEECCHHHHCCCHHEEHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH EKTGKLLVSGLVEWSFDWVKEKVENKGFKLNKKFQTNEWCTAIFSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]