Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311092

Identifier: 18311092

GI number: 18311092

Start: 2420422

End: 2421111

Strand: Direct

Name: 18311092

Synonym: CPE2110

Alternate gene names: NA

Gene position: 2420422-2421111 (Clockwise)

Preceding gene: 18311085

Following gene: 18311093

Centisome position: 79.84

GC content: 28.99

Gene sequence:

>690_bases
ATGGAAGCTGGTTTAGTTAATCTAATTACAAGCAAAGATGAAAACTGGGACAAAAGATGGAAGTATAACTGTGCAATGTT
TATATTATGTTATATTTTCATGGGGGCTGTCACAGGAATAACTAATGACTCTTATTTATCTTATTTAAACATCACTGTTC
CTAATGTAGTTAAAGCACTTCCTACCTATGCATCAATTGGAACCTTCATAATAGCAATGCTTTTACTATTAACTCATAAA
GTAGGATTCAAGAAATTAATATTACTTGCACCTATTCTTTCAGTTCTTGGTTTATTGGTTTGTATATATAGCAAAAATGG
TTTAATCATAACCTTTGCATATATAGTTGTCAATGTTGGTTTAGGAATGTTTGACTGTATTTATCCTGTAATGTTTACAT
CATATACTCCTAGAAAAGAAAGAACTAAAATGTTCTCTAGAGTTATGTACTGTAACCTTATTAGCCAATCAATTTTAACA
TTTTTCAATGGTAAAATTGTTGTTTGGAAATTTGCTAAATCTTTAGGTGTCTCTTATGATAATGCTTCTGTTTTATCAGA
AAATCAAGATGCCTTAAGTTCTGTTCAATTAATGGCATATTCAGATTCATATAAATTTGTACTTTGGATTGCAATAGCCT
TAACAGTAATAGCTTCAGTCTTTCTATTATTCTTAAAAGAAAAAAGTTAA

Upstream 100 bases:

>100_bases
TTTTTCTTAATGTATTTTTTATTGTTTTGATTTTTTTATCTATAAAGAGTTATTATTAAATTGAAAATTTAAATAAATTT
ATAAAATTGGGGGAATTTAT

Downstream 100 bases:

>100_bases
GATTATAGAGAAACTCCTGAAGAAATTCAAGCTAGAAAAGGAGAAAAAGCCTTTGATTTCAAATTATTCGCTAATAAATA
TGTTATCTTATGGATTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Permease Of Facilitator Superfamily

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKALPTYASIGTFIIAMLLLLTHK
VGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVGLGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILT
FFNGKIVVWKFAKSLGVSYDNASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS

Sequences:

>Translated_229_residues
MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKALPTYASIGTFIIAMLLLLTHK
VGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVGLGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILT
FFNGKIVVWKFAKSLGVSYDNASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS
>Mature_229_residues
MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKALPTYASIGTFIIAMLLLLTHK
VGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVGLGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILT
FFNGKIVVWKFAKSLGVSYDNASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25747; Mature: 25747

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKAL
CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCHHHHHHHH
PTYASIGTFIIAMLLLLTHKVGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHC
LGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILTFFNGKIVVWKFAKSLGVSYD
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCC
NASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS
CHHHHCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKAL
CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCHHHHHHHH
PTYASIGTFIIAMLLLLTHKVGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHC
LGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILTFFNGKIVVWKFAKSLGVSYD
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCC
NASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS
CHHHHCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA