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The map label for this gene is ycbZ [H]

Identifier: 18311033

GI number: 18311033

Start: 2340992

End: 2343277

Strand: Reverse

Name: ycbZ [H]

Synonym: CPE2051

Alternate gene names: 18311033

Gene position: 2343277-2340992 (Counterclockwise)

Preceding gene: 18311034

Following gene: 18311032

Centisome position: 77.3

GC content: 28.22

Gene sequence:

>2286_bases
ATGAGAAGAGAGTTAACTCCAAAAGAAGTAATTTATAATGAAGATTTTACTAGTGGGATAGGTGAGAAAGAATCCTATGG
TAATGAATATCAAGGGGTTTTTAAGAAAATTGATGAAGCATTAAGCATAAATAAAGAAGGATTTAATGTTTACCTAATTG
ATGAATTTTCAAAACAAAAGCTTAAAGACATAATGGTACATCTAGAAGATAAAATGAAAAGTAGAGGTAAGCCTAAGGAT
ATATGTTATGTTACCTTAGAAGATATTAGGGTTCCTAAGGTTATATTTCTAGAAAATGGAATGGGAGAAAAGTTAGATGA
AACTTTAGAATATCTAAAATCTTTTTATTATGATGAAATATATGCTTTTTATAATTCTTCAATAAATAAAGAAAAGGAAG
AGATTATAAATGATATACAAAAAAAGAGAAATTATTATATAGGGGACTTAATAAAGAGTGCAAAGGAAGAAGGATTTGAT
TTAAAAGCTACTTCTTCAGGCTTTGCATTTATTCCTTTAGTAGATGGAGAAGCTATGACAGAAGAGGAGTTTGATGATCT
AGAAGAGAATAGTAAAGGGGATATTTCTGTAAAGGCTGACAAGTTAAAAGAGGGAGCAGAAGGAGTTCTTGAAGAATTAA
AAAATATAGAGTTAGATTCCATTGAAAAATTAAAGGGGATACTTAGAACCTATTTAGAAAATGAATCAGCAAGTGTTAAA
GAAAAAATAAAGGATAATTTTAAAGATGAGAATGAAGCTTATAACTATCTTATAGATGTTTGTGAAAGTTTAGAAAACTT
ATTAATTGATAATTACACAATAAACTTTGATGATGATGAAGAAAAGATAAATGAGATTATTTCAAAGTATGTTTGTAATA
TCATAAAAAACAGCAAGGGGCAAGAGGCTCCTAAGGTTATTTTTGAAGAAGATCCAAGCTTAAATAATCTTTTAGGAACT
ATAGAGTATGAAAATCATAATGGTGTTTATTCAACTGATGTAAAACTTATAAAATCAGGTTCATTACTTGAAGCAAATGA
AGGGTGCATAATACTTAGGTTAAGTTCTTTAGTTAATAATGCAAATAGCTATTATTATTTGAGAAGGGCGTTACTTCATG
GAAAGATAAATTATGATTTTAATAGAGGATATTTAGAAGTGCTTTCATTAAATGGGTTAAATCCAGATCCAATACCTATT
AAGGTAAATGTAATTTTAATAGGAGATTTTGAAAGTTATGATATTTTGTATAACCATGATGAAGACTTCAAGAAAATATT
TAGGATTAGAGCTGAATTTTCAAACTTAATAGGAATAGATGAAAATAAAAAATCTTTGGTAGATCTTGTTGATAAAGTCA
TAATAGATAATGATTTAATAAAGATCTCTACTTCTGGAATCAATGCTATTGGAAAACAATTAGCAAGAAAAGCTGGAACA
AGGAAGAAAATTCTTTGGGATATTGATGAAATAGAGAGAGTATTACTTCTTGGAAATGAAGAGGCAAAAAATAATAATAA
GTCATTGATAGATAAGGATTCAATAGAAGCGGTTGTAAATCAATGCAGTGAAATTGAAAAAGATTATTTAGAAATGTATG
AGGAAAAGAAGATAATTTTAGATATAGAAGATAGAATTATTGGAAGTGTAAATGGATTATCTGTTATAGATTTTGGTTAT
ATGCGCTTTGGAAAGCCTATGAGAATAACTTGTACTTGTTATAAAGGTAGCGGAAAAATTATGGATGCACAAAGAGAAAG
CAATTTAAGTGGAAACATTCATAATAAATCTTTAAATATTCTAAGAGGCTTTTTAAGTAGTTTCTTTAATTCTTATGAAG
CTTTACCTGTGGATTTTCAACTAAGTTTTGAGCAGCTTTATGGAAAAATAGAAGGAGATAGTGCTTCTGTGGCAGAAGTA
ATTGCTATGATTTCTTCTTTAAGTAAAATACCTGTAGATCAAAGCATTGCAGTAACAGGTTCATTAAATCAATTTGGACA
GGTGCAACCAATAGGTGGAGTAAATGAAAAAATAGAAGGATTTTTCAATGTATGCAAGAAAATTGGCACTTATATTGGAA
AAGCTGTTTTAATACCAGAAAGCAATAAAGATGAGCTTATATTAAATAGTGAAATAGAAGAGGCTGTGAGAAAGGGCGAG
TTTAAGATATATCTTATGAAAGATATAAATGAAGCTCTTAGTACATTGCTTCTAAATGACACTATGTCTCTTGAAGATAT
AGGAAATAAAATTAGTGAAGAAATTAAAAAATTTAAGGACAATTAA

Upstream 100 bases:

>100_bases
GATGGCTAATTTTAAAGTTATAGAATATTAATATAATAAAGTACTTATAAAGAGGAGGTTACTCTATTAAAGCTAAGATT
AGTTTTATGAGTGAATTTTT

Downstream 100 bases:

>100_bases
TATCTTATTAAGCCTATAGAGTTTGTTTCTATAGGTTTAATTTATTTTAGTATTATTTGACATAAATAATTAAAATATGT
TAAAATATGGAAAAGAAGCT

Product: ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MRRELTPKEVIYNEDFTSGIGEKESYGNEYQGVFKKIDEALSINKEGFNVYLIDEFSKQKLKDIMVHLEDKMKSRGKPKD
ICYVTLEDIRVPKVIFLENGMGEKLDETLEYLKSFYYDEIYAFYNSSINKEKEEIINDIQKKRNYYIGDLIKSAKEEGFD
LKATSSGFAFIPLVDGEAMTEEEFDDLEENSKGDISVKADKLKEGAEGVLEELKNIELDSIEKLKGILRTYLENESASVK
EKIKDNFKDENEAYNYLIDVCESLENLLIDNYTINFDDDEEKINEIISKYVCNIIKNSKGQEAPKVIFEEDPSLNNLLGT
IEYENHNGVYSTDVKLIKSGSLLEANEGCIILRLSSLVNNANSYYYLRRALLHGKINYDFNRGYLEVLSLNGLNPDPIPI
KVNVILIGDFESYDILYNHDEDFKKIFRIRAEFSNLIGIDENKKSLVDLVDKVIIDNDLIKISTSGINAIGKQLARKAGT
RKKILWDIDEIERVLLLGNEEAKNNNKSLIDKDSIEAVVNQCSEIEKDYLEMYEEKKIILDIEDRIIGSVNGLSVIDFGY
MRFGKPMRITCTCYKGSGKIMDAQRESNLSGNIHNKSLNILRGFLSSFFNSYEALPVDFQLSFEQLYGKIEGDSASVAEV
IAMISSLSKIPVDQSIAVTGSLNQFGQVQPIGGVNEKIEGFFNVCKKIGTYIGKAVLIPESNKDELILNSEIEEAVRKGE
FKIYLMKDINEALSTLLLNDTMSLEDIGNKISEEIKKFKDN

Sequences:

>Translated_761_residues
MRRELTPKEVIYNEDFTSGIGEKESYGNEYQGVFKKIDEALSINKEGFNVYLIDEFSKQKLKDIMVHLEDKMKSRGKPKD
ICYVTLEDIRVPKVIFLENGMGEKLDETLEYLKSFYYDEIYAFYNSSINKEKEEIINDIQKKRNYYIGDLIKSAKEEGFD
LKATSSGFAFIPLVDGEAMTEEEFDDLEENSKGDISVKADKLKEGAEGVLEELKNIELDSIEKLKGILRTYLENESASVK
EKIKDNFKDENEAYNYLIDVCESLENLLIDNYTINFDDDEEKINEIISKYVCNIIKNSKGQEAPKVIFEEDPSLNNLLGT
IEYENHNGVYSTDVKLIKSGSLLEANEGCIILRLSSLVNNANSYYYLRRALLHGKINYDFNRGYLEVLSLNGLNPDPIPI
KVNVILIGDFESYDILYNHDEDFKKIFRIRAEFSNLIGIDENKKSLVDLVDKVIIDNDLIKISTSGINAIGKQLARKAGT
RKKILWDIDEIERVLLLGNEEAKNNNKSLIDKDSIEAVVNQCSEIEKDYLEMYEEKKIILDIEDRIIGSVNGLSVIDFGY
MRFGKPMRITCTCYKGSGKIMDAQRESNLSGNIHNKSLNILRGFLSSFFNSYEALPVDFQLSFEQLYGKIEGDSASVAEV
IAMISSLSKIPVDQSIAVTGSLNQFGQVQPIGGVNEKIEGFFNVCKKIGTYIGKAVLIPESNKDELILNSEIEEAVRKGE
FKIYLMKDINEALSTLLLNDTMSLEDIGNKISEEIKKFKDN
>Mature_761_residues
MRRELTPKEVIYNEDFTSGIGEKESYGNEYQGVFKKIDEALSINKEGFNVYLIDEFSKQKLKDIMVHLEDKMKSRGKPKD
ICYVTLEDIRVPKVIFLENGMGEKLDETLEYLKSFYYDEIYAFYNSSINKEKEEIINDIQKKRNYYIGDLIKSAKEEGFD
LKATSSGFAFIPLVDGEAMTEEEFDDLEENSKGDISVKADKLKEGAEGVLEELKNIELDSIEKLKGILRTYLENESASVK
EKIKDNFKDENEAYNYLIDVCESLENLLIDNYTINFDDDEEKINEIISKYVCNIIKNSKGQEAPKVIFEEDPSLNNLLGT
IEYENHNGVYSTDVKLIKSGSLLEANEGCIILRLSSLVNNANSYYYLRRALLHGKINYDFNRGYLEVLSLNGLNPDPIPI
KVNVILIGDFESYDILYNHDEDFKKIFRIRAEFSNLIGIDENKKSLVDLVDKVIIDNDLIKISTSGINAIGKQLARKAGT
RKKILWDIDEIERVLLLGNEEAKNNNKSLIDKDSIEAVVNQCSEIEKDYLEMYEEKKIILDIEDRIIGSVNGLSVIDFGY
MRFGKPMRITCTCYKGSGKIMDAQRESNLSGNIHNKSLNILRGFLSSFFNSYEALPVDFQLSFEQLYGKIEGDSASVAEV
IAMISSLSKIPVDQSIAVTGSLNQFGQVQPIGGVNEKIEGFFNVCKKIGTYIGKAVLIPESNKDELILNSEIEEAVRKGE
FKIYLMKDINEALSTLLLNDTMSLEDIGNKISEEIKKFKDN

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=430, Percent_Identity=32.093023255814, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1786643, Length=218, Percent_Identity=27.5229357798165, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 86512; Mature: 86512

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRELTPKEVIYNEDFTSGIGEKESYGNEYQGVFKKIDEALSINKEGFNVYLIDEFSKQK
CCCCCCHHHHEECCCHHCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH
LKDIMVHLEDKMKSRGKPKDICYVTLEDIRVPKVIFLENGMGEKLDETLEYLKSFYYDEI
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
YAFYNSSINKEKEEIINDIQKKRNYYIGDLIKSAKEEGFDLKATSSGFAFIPLVDGEAMT
HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCC
EEEFDDLEENSKGDISVKADKLKEGAEGVLEELKNIELDSIEKLKGILRTYLENESASVK
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
EKIKDNFKDENEAYNYLIDVCESLENLLIDNYTINFDDDEEKINEIISKYVCNIIKNSKG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCC
QEAPKVIFEEDPSLNNLLGTIEYENHNGVYSTDVKLIKSGSLLEANEGCIILRLSSLVNN
CCCCCEEECCCCCCCCCEEEEEECCCCCEEECCHHEEECCCEEECCCCEEEEEEHHHHCC
ANSYYYLRRALLHGKINYDFNRGYLEVLSLNGLNPDPIPIKVNVILIGDFESYDILYNHD
CCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEECCC
EDFKKIFRIRAEFSNLIGIDENKKSLVDLVDKVIIDNDLIKISTSGINAIGKQLARKAGT
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCC
RKKILWDIDEIERVLLLGNEEAKNNNKSLIDKDSIEAVVNQCSEIEKDYLEMYEEKKIIL
CCEEEECHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
DIEDRIIGSVNGLSVIDFGYMRFGKPMRITCTCYKGSGKIMDAQRESNLSGNIHNKSLNI
EECHHHHCCCCCCEEEEEHHHHCCCCEEEEEEEECCCCCEEECHHCCCCCCCCCHHHHHH
LRGFLSSFFNSYEALPVDFQLSFEQLYGKIEGDSASVAEVIAMISSLSKIPVDQSIAVTG
HHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE
SLNQFGQVQPIGGVNEKIEGFFNVCKKIGTYIGKAVLIPESNKDELILNSEIEEAVRKGE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEECHHHHHHHHCCC
FKIYLMKDINEALSTLLLNDTMSLEDIGNKISEEIKKFKDN
EEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRELTPKEVIYNEDFTSGIGEKESYGNEYQGVFKKIDEALSINKEGFNVYLIDEFSKQK
CCCCCCHHHHEECCCHHCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH
LKDIMVHLEDKMKSRGKPKDICYVTLEDIRVPKVIFLENGMGEKLDETLEYLKSFYYDEI
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
YAFYNSSINKEKEEIINDIQKKRNYYIGDLIKSAKEEGFDLKATSSGFAFIPLVDGEAMT
HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCC
EEEFDDLEENSKGDISVKADKLKEGAEGVLEELKNIELDSIEKLKGILRTYLENESASVK
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
EKIKDNFKDENEAYNYLIDVCESLENLLIDNYTINFDDDEEKINEIISKYVCNIIKNSKG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCC
QEAPKVIFEEDPSLNNLLGTIEYENHNGVYSTDVKLIKSGSLLEANEGCIILRLSSLVNN
CCCCCEEECCCCCCCCCEEEEEECCCCCEEECCHHEEECCCEEECCCCEEEEEEHHHHCC
ANSYYYLRRALLHGKINYDFNRGYLEVLSLNGLNPDPIPIKVNVILIGDFESYDILYNHD
CCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEECCC
EDFKKIFRIRAEFSNLIGIDENKKSLVDLVDKVIIDNDLIKISTSGINAIGKQLARKAGT
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCC
RKKILWDIDEIERVLLLGNEEAKNNNKSLIDKDSIEAVVNQCSEIEKDYLEMYEEKKIIL
CCEEEECHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
DIEDRIIGSVNGLSVIDFGYMRFGKPMRITCTCYKGSGKIMDAQRESNLSGNIHNKSLNI
EECHHHHCCCCCCEEEEEHHHHCCCCEEEEEEEECCCCCEEECHHCCCCCCCCCHHHHHH
LRGFLSSFFNSYEALPVDFQLSFEQLYGKIEGDSASVAEVIAMISSLSKIPVDQSIAVTG
HHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE
SLNQFGQVQPIGGVNEKIEGFFNVCKKIGTYIGKAVLIPESNKDELILNSEIEEAVRKGE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEECHHHHHHHHCCC
FKIYLMKDINEALSTLLLNDTMSLEDIGNKISEEIKKFKDN
EEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]