The gene/protein map for NC_003366 is currently unavailable.
Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is gpr [H]

Identifier: 18311023

GI number: 18311023

Start: 2332979

End: 2333956

Strand: Reverse

Name: gpr [H]

Synonym: CPE2041

Alternate gene names: 18311023

Gene position: 2333956-2332979 (Counterclockwise)

Preceding gene: 18311025

Following gene: 18311022

Centisome position: 76.99

GC content: 34.36

Gene sequence:

>978_bases
ATGTACAATGTAAGAACTGATTTAGCTGTTGAAAGTAGAGAGATTTATAAACATAGATATAATAGGGAAATTGATGGGGT
AGTTTTTGAAGAAAAGACTGTGGAAGAGGATATTAAAGTTACAAATGTTGACATATTAAATGAGGAAGGCGCTAAAGCTA
TGGAAAAACCTATAGGTAGATATGTTACCATAGATATCCCTGAGTACACTCATTATGACGGTGGCATAATGGATGAGGTT
TCTCATGTGGTGGCAGCCTCCTTAGAAGAACTTATTAATTTACCAGAGGAAAGAACGGCTTTAGTAGTTGGGCTTGGAAA
CTGGAATGTTACACCTGACGCCATAGGACCTAAGGTTGTAGGAAAATTAATGGTAACAAGACATTTAAAGAAGGTTATGC
CAGACATAATAGATGATTCAGTAAGACCAGTTTGCGCCATAGCACCTGGAGTTTTAGGCATAACAGGAATTGAAACTGGA
GAGATAATAAAATCATTAGTGGAAAAAATAAAACCAGATTTAGTAGTTTGTATTGATGCCTTAGCTTCAAGAAAACTAGA
AAGAGTGGCTAGAACCATTCAAATAAGCAATACTGGAATATCACCAGGGGCTGGAGTTGGAAATCATAGAATGCAAATAA
ATGAAGAAAGCTTAGGTATCCCTGTTATTGCCTTAGGAGTACCAACTGTTGTGGATGCAGCTACTATTGCAAATGATGCC
ATGGATTTAGTTTTAGATGAAATGATAAATCAAGCAGATGCTGGCAAAGAGTTTTATAATATATTAAATAACATAGATAA
GAATGAAAAGGGAATGATGATAAAGAGCCTTTTAGATCCTTATGTAGGAGACTTAATGGTTACCCCAAAAGAAATAGACG
ATATAATAGAATCAGTTTCAAAAATAATAGCAAATGGAATTAATATAGCCCTTCAACCTAATATGGTGTTAGAGGATATA
AATAAATTTTTAAACTAA

Upstream 100 bases:

>100_bases
ATATATAAGTTCAAGTCTTTTTTCGTGTTTATCGACATAATTATCATTTTTAAGGAGATTATATATAATATATAAATTTA
AATTAAAAAGAGGTGGAAAA

Downstream 100 bases:

>100_bases
GACTGGGTTTAAAATTAAAAGTTTTATTAAGATATTTTTTAGAATTATGAGTGAATTTGAAGAAGAATAAATTAAATATT
TACCTAAAGAGAGTAACATA

Product: germination protease

Products: NA

Alternate protein names: GPR endopeptidase; Germination proteinase; Spore protease [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGRYVTIDIPEYTHYDGGIMDEV
SHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVVGKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETG
EIIKSLVEKIKPDLVVCIDALASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA
MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVSKIIANGINIALQPNMVLEDI
NKFLN

Sequences:

>Translated_325_residues
MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGRYVTIDIPEYTHYDGGIMDEV
SHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVVGKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETG
EIIKSLVEKIKPDLVVCIDALASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA
MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVSKIIANGINIALQPNMVLEDI
NKFLN
>Mature_325_residues
MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGRYVTIDIPEYTHYDGGIMDEV
SHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVVGKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETG
EIIKSLVEKIKPDLVVCIDALASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA
MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVSKIIANGINIALQPNMVLEDI
NKFLN

Specific function: Initiates the rapid degradation of small, acid-soluble proteins during spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005080
- InterPro:   IPR000671
- ProDom:   PD041835 [H]

Pfam domain/function: PF03418 Peptidase_A25 [H]

EC number: =3.4.24.78 [H]

Molecular weight: Translated: 35635; Mature: 35635

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGR
CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCEEEEEEEECCCCHHHHHHCCCC
YVTIDIPEYTHYDGGIMDEVSHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVV
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCCHHHH
GKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETGEIIKSLVEKIKPDLVVCIDA
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHEECCCCHHHHHHHHHHHHCCHHHHHHHH
LASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA
HHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHH
MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVS
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEECHHHHHHHHHHHH
KIIANGINIALQPNMVLEDINKFLN
HHHHCCCCEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGR
CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCEEEEEEEECCCCHHHHHHCCCC
YVTIDIPEYTHYDGGIMDEVSHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVV
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCCHHHH
GKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETGEIIKSLVEKIKPDLVVCIDA
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHEECCCCHHHHHHHHHHHHCCHHHHHHHH
LASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA
HHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHH
MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVS
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEECHHHHHHHHHHHH
KIIANGINIALQPNMVLEDINKFLN
HHHHCCCCEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA