| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is spoIIP [H]
Identifier: 18311022
GI number: 18311022
Start: 2331745
End: 2332830
Strand: Reverse
Name: spoIIP [H]
Synonym: CPE2040
Alternate gene names: 18311022
Gene position: 2332830-2331745 (Counterclockwise)
Preceding gene: 18311023
Following gene: 18311021
Centisome position: 76.95
GC content: 29.37
Gene sequence:
>1086_bases GTGAGAGGTATTAATAAAAGAGAGATACCCATAGGAGTGATTGTTCTTTTATCTTTACTTATAATATTTATGTTTAGATT TATGAAGATTGCAGCAAGTAAAGACATGAGAGAAAATTTATCATATATACAACTTTTAAATGCAGGAATGCCTGTTGCAA AGGGAACATATTACGATGAGAATGCTTATTTAGAAAGTAATATTACATTAAAAAGTTTAGCCTTAGAAACTTTAAATATA AAGCCTCTAGATCCGATAGAGTTAGTAATGAATGAAGTGCCTTACTTTGGTGCAGTAAATAAAATAGCTTCAATTGATAA AGTTAATTATGTTTCTGCTGAAAAAGTATCTTCATTTGATTTAAACAAAGATAGTATAGATATAGTTTCTGAGGAAGAAT CTAAGGAAAGTGCAGAATTAGAAGCTAGTAAAAATAGTGAAGTTTATGATCCAAGTTTAAAAAAGGAACTAGATCAGTCT AAGCCAGAGGTGCTTATTTATCATACTCATAATTCAGAGGGGTATACTGAGGAGAGAACTTCAAACAATGAAGAACATAA CGTAGTTGGAGTAGGAACTTTAGTTGCAAAAGAACTTGAAGAAAACTATGGTATATCAGTTATTCATGATAAAACAAATC ACTCAGCTTCATATGAGCAATCTTACAATAAATCTAGAGAGACAGTTAAAAAATATATTAATGAATATGATGATTTTAAG ATGGTAATAGATATTCATAGAGATTCTGTTGGAGAGCATAACAAAAAGAATTTAACTGCTAATATAAATGGAGAAAGTTT AGCTAAGATTATGTTTGTTACAACTAAGAATAGCCAATATTTTAATGATGCTGAATCCTTGGCCTATAGATTTATTAATA AAGCCAATGAGCTTTTTCCTGATATTTTAAGAAGACAGGAAACCTTTAAGTATGATAGGGGAAAAAATGCGTTTAACCAA CAATATAATAAGAATTCAATGCTTATTGAAGTTGGTGCAGAAGTAAATACTTCTAAAGAGGCTCAAGCTACAGCAAAGTA TATAGCTAGATTAATAGCAGAAGAATTAAACAGAAAAAGTGAATAA
Upstream 100 bases:
>100_bases GAGTGAATTTGAAGAAGAATAAATTAAATATTTACCTAAAGAGAGTAACATAATATTTAACCTATCCTCATATAAATGAA AATATGAGGGAGGGGATAAT
Downstream 100 bases:
>100_bases AATAAAAGAATTTTGAACATCCTTATAGATAGTAATCTATGGGGGTGTTTTATTTTGAAAAAATTTATGACAATATTAAC TCTTGCAATAATAGTTTTTT
Product: stage II sporulation protein P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MRGINKREIPIGVIVLLSLLIIFMFRFMKIAASKDMRENLSYIQLLNAGMPVAKGTYYDENAYLESNITLKSLALETLNI KPLDPIELVMNEVPYFGAVNKIASIDKVNYVSAEKVSSFDLNKDSIDIVSEEESKESAELEASKNSEVYDPSLKKELDQS KPEVLIYHTHNSEGYTEERTSNNEEHNVVGVGTLVAKELEENYGISVIHDKTNHSASYEQSYNKSRETVKKYINEYDDFK MVIDIHRDSVGEHNKKNLTANINGESLAKIMFVTTKNSQYFNDAESLAYRFINKANELFPDILRRQETFKYDRGKNAFNQ QYNKNSMLIEVGAEVNTSKEAQATAKYIARLIAEELNRKSE
Sequences:
>Translated_361_residues MRGINKREIPIGVIVLLSLLIIFMFRFMKIAASKDMRENLSYIQLLNAGMPVAKGTYYDENAYLESNITLKSLALETLNI KPLDPIELVMNEVPYFGAVNKIASIDKVNYVSAEKVSSFDLNKDSIDIVSEEESKESAELEASKNSEVYDPSLKKELDQS KPEVLIYHTHNSEGYTEERTSNNEEHNVVGVGTLVAKELEENYGISVIHDKTNHSASYEQSYNKSRETVKKYINEYDDFK MVIDIHRDSVGEHNKKNLTANINGESLAKIMFVTTKNSQYFNDAESLAYRFINKANELFPDILRRQETFKYDRGKNAFNQ QYNKNSMLIEVGAEVNTSKEAQATAKYIARLIAEELNRKSE >Mature_361_residues MRGINKREIPIGVIVLLSLLIIFMFRFMKIAASKDMRENLSYIQLLNAGMPVAKGTYYDENAYLESNITLKSLALETLNI KPLDPIELVMNEVPYFGAVNKIASIDKVNYVSAEKVSSFDLNKDSIDIVSEEESKESAELEASKNSEVYDPSLKKELDQS KPEVLIYHTHNSEGYTEERTSNNEEHNVVGVGTLVAKELEENYGISVIHDKTNHSASYEQSYNKSRETVKKYINEYDDFK MVIDIHRDSVGEHNKKNLTANINGESLAKIMFVTTKNSQYFNDAESLAYRFINKANELFPDILRRQETFKYDRGKNAFNQ QYNKNSMLIEVGAEVNTSKEAQATAKYIARLIAEELNRKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010897 [H]
Pfam domain/function: PF07454 SpoIIP [H]
EC number: NA
Molecular weight: Translated: 41182; Mature: 41182
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGINKREIPIGVIVLLSLLIIFMFRFMKIAASKDMRENLSYIQLLNAGMPVAKGTYYDE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCEECC NAYLESNITLKSLALETLNIKPLDPIELVMNEVPYFGAVNKIASIDKVNYVSAEKVSSFD CCEEECCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCC LNKDSIDIVSEEESKESAELEASKNSEVYDPSLKKELDQSKPEVLIYHTHNSEGYTEERT CCCCCEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHC SNNEEHNVVGVGTLVAKELEENYGISVIHDKTNHSASYEQSYNKSRETVKKYINEYDDFK CCCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE MVIDIHRDSVGEHNKKNLTANINGESLAKIMFVTTKNSQYFNDAESLAYRFINKANELFP EEEEEECCCCCCCCCCCEEEECCHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH DILRRQETFKYDRGKNAFNQQYNKNSMLIEVGAEVNTSKEAQATAKYIARLIAEELNRKS HHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC E C >Mature Secondary Structure MRGINKREIPIGVIVLLSLLIIFMFRFMKIAASKDMRENLSYIQLLNAGMPVAKGTYYDE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCEECC NAYLESNITLKSLALETLNIKPLDPIELVMNEVPYFGAVNKIASIDKVNYVSAEKVSSFD CCEEECCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCC LNKDSIDIVSEEESKESAELEASKNSEVYDPSLKKELDQSKPEVLIYHTHNSEGYTEERT CCCCCEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHC SNNEEHNVVGVGTLVAKELEENYGISVIHDKTNHSASYEQSYNKSRETVKKYINEYDDFK CCCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE MVIDIHRDSVGEHNKKNLTANINGESLAKIMFVTTKNSQYFNDAESLAYRFINKANELFP EEEEEECCCCCCCCCCCEEEECCHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH DILRRQETFKYDRGKNAFNQQYNKNSMLIEVGAEVNTSKEAQATAKYIARLIAEELNRKS HHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]