BacMap

Definition	Clostridium perfringens str. 13, complete genome.
Accession	NC_003366
Length	3,031,430

Click here to switch to the map view.

The map label for this gene is yhcG [H]

Identifier: 18311013

GI number: 18311013

Start: 2321610

End: 2322302

Strand: Reverse

Name: yhcG [H]

Synonym: CPE2031

Alternate gene names: 18311013

Gene position: 2322302-2321610 (Counterclockwise)

Preceding gene: 18311014

Following gene: 18311012

Centisome position: 76.61

GC content: 28.72

Gene sequence:

>693_bases
ATGATAGAAGTGGTTGGTGTTAAAAAGAAGTTTAGAAGAAAAAAAGTTTTAGAGAATATTACTTTTAATGTAAAGAAGGG
AGAAATAACTGCTTTACTAGGGTTAAATGGAGTGGGAAAGTCTACTCTTTTAAAGATAATTATGGGCCTTGTTAAGCAAG
ATGAGGGGGAAGTGCTTTTTAATGGAGAAAAGCTAAATTATAAGACCTATGAAAACATTGCCTTTGTACCTGATGTTTTA
AATACTTATGGTGATATGAAAATAAAAGATGCCTTTGAATATATGAGTATGATGTATGAAAAGTGGGATATGGATAAAGC
TTATGAAATGCTAAAAGATTTTAAATTAACTGATGACTTAAAAATAAATAAACTTTCTAAGGGGAATATAGCAAGGGTAA
AACTTATACTAGGTTTTGCTAGACACCCAGAATATTTACTTTTAGATGAACCTTTTTCAGGTATAGATATTTTTACAAGA
GAGAAGTTTATAGAATCTTTAATTGGCTATATGGATAACGATATTGGAATTTTACTAACAACTCATGAATTAAAAGAGGT
TGAAAATATAGTTGATAAAGTTGTCTTTTTAAGTGATGGAAATATTAAAATAGAATTTTATGTTGAAGATGTAAGAGAAA
ATGAAGGATTATCAATGGTAGAGAAAATAAGGGAGGTACATGAAGGTGAGTAA

Upstream 100 bases:

>100_bases
CAAGTAGATGTATTAGTGATATAATACACTTAAGGTTAGTGTATTAATGAAGTAATACATGAGTACAAAAATATATTAAC
ATAAATCTAGGGGTGATTAA

Downstream 100 bases:

>100_bases
GGGGAATTTTAAAAAGTTAAGTTATCTTTTAAATTTACAGATATTAAGAGATTTAAAAATAACAATAGGATCAGCTGTTG
GAATTATGCTTTTAAACATT

Product: ABC transporter

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MIEVVGVKKKFRRKKVLENITFNVKKGEITALLGLNGVGKSTLLKIIMGLVKQDEGEVLFNGEKLNYKTYENIAFVPDVL
NTYGDMKIKDAFEYMSMMYEKWDMDKAYEMLKDFKLTDDLKINKLSKGNIARVKLILGFARHPEYLLLDEPFSGIDIFTR
EKFIESLIGYMDNDIGILLTTHELKEVENIVDKVVFLSDGNIKIEFYVEDVRENEGLSMVEKIREVHEGE

Sequences:

>Translated_230_residues
MIEVVGVKKKFRRKKVLENITFNVKKGEITALLGLNGVGKSTLLKIIMGLVKQDEGEVLFNGEKLNYKTYENIAFVPDVL
NTYGDMKIKDAFEYMSMMYEKWDMDKAYEMLKDFKLTDDLKINKLSKGNIARVKLILGFARHPEYLLLDEPFSGIDIFTR
EKFIESLIGYMDNDIGILLTTHELKEVENIVDKVVFLSDGNIKIEFYVEDVRENEGLSMVEKIREVHEGE
>Mature_230_residues
MIEVVGVKKKFRRKKVLENITFNVKKGEITALLGLNGVGKSTLLKIIMGLVKQDEGEVLFNGEKLNYKTYENIAFVPDVL
NTYGDMKIKDAFEYMSMMYEKWDMDKAYEMLKDFKLTDDLKINKLSKGNIARVKLILGFARHPEYLLLDEPFSGIDIFTR
EKFIESLIGYMDNDIGILLTTHELKEVENIVDKVVFLSDGNIKIEFYVEDVRENEGLSMVEKIREVHEGE

Specific function: Part Of The Abc Transporter Complex Cysawtp Involved In Sulfate/Thiosulfate Import. Responsible For Energy Coupling To The Transport System. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=205, Percent_Identity=29.2682926829268, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI6005701, Length=204, Percent_Identity=30.3921568627451, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI27477115, Length=215, Percent_Identity=30.6976744186047, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI27436953, Length=218, Percent_Identity=30.2752293577982, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI27262624, Length=217, Percent_Identity=27.6497695852535, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI27262626, Length=217, Percent_Identity=27.6497695852535, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI31657092, Length=213, Percent_Identity=25.8215962441315, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI30795238, Length=219, Percent_Identity=26.9406392694064, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI27881501, Length=219, Percent_Identity=26.9406392694064, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI45446740, Length=202, Percent_Identity=23.2673267326733, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI47078218, Length=202, Percent_Identity=23.2673267326733, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI21536376, Length=201, Percent_Identity=25.3731343283582, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI11967969, Length=217, Percent_Identity=20.7373271889401, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=32.093023255814, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789593, Length=212, Percent_Identity=26.4150943396226, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=26.0869565217391, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1786563, Length=210, Percent_Identity=30, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789891, Length=215, Percent_Identity=28.8372093023256, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI87081782, Length=223, Percent_Identity=26.9058295964126, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788450, Length=232, Percent_Identity=27.5862068965517, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1788165, Length=203, Percent_Identity=30.5418719211823, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081709, Length=210, Percent_Identity=27.1428571428571, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787792, Length=208, Percent_Identity=28.3653846153846, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=27.2300469483568, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788472, Length=219, Percent_Identity=26.4840182648402, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI48995001, Length=209, Percent_Identity=25.8373205741627, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789672, Length=214, Percent_Identity=25.2336448598131, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786698, Length=191, Percent_Identity=30.8900523560209, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789586, Length=217, Percent_Identity=26.2672811059908, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786398, Length=243, Percent_Identity=27.1604938271605, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790162, Length=216, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87081791, Length=208, Percent_Identity=25, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=23.2558139534884, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1789991, Length=220, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786803, Length=223, Percent_Identity=23.7668161434978, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788225, Length=219, Percent_Identity=24.6575342465753, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788210, Length=212, Percent_Identity=26.4150943396226, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786319, Length=196, Percent_Identity=29.0816326530612, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790525, Length=214, Percent_Identity=22.8971962616822, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI87081834, Length=208, Percent_Identity=25.4807692307692, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082064, Length=175, Percent_Identity=26.8571428571429, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787712, Length=200, Percent_Identity=27, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789873, Length=216, Percent_Identity=24.537037037037, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789963, Length=213, Percent_Identity=23.943661971831, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787500, Length=207, Percent_Identity=26.0869565217391, Blast_Score=62, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=198, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17510237, Length=212, Percent_Identity=26.8867924528302, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI86563255, Length=222, Percent_Identity=26.1261261261261, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=205, Percent_Identity=26.8292682926829, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=205, Percent_Identity=26.8292682926829, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=205, Percent_Identity=26.8292682926829, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17552010, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569081, Length=220, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17539902, Length=219, Percent_Identity=23.2876712328767, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI116007328, Length=209, Percent_Identity=31.5789473684211, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28574150, Length=209, Percent_Identity=31.5789473684211, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI221512771, Length=220, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24648314, Length=209, Percent_Identity=28.7081339712919, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI221500365, Length=198, Percent_Identity=25.2525252525253, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI116007184, Length=198, Percent_Identity=25.2525252525253, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24666092, Length=210, Percent_Identity=27.1428571428571, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24650855, Length=192, Percent_Identity=30.2083333333333, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24650853, Length=192, Percent_Identity=30.2083333333333, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281362751, Length=196, Percent_Identity=29.0816326530612, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI28571209, Length=212, Percent_Identity=28.3018867924528, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24582014, Length=217, Percent_Identity=27.6497695852535, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24582012, Length=217, Percent_Identity=27.6497695852535, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI85725262, Length=180, Percent_Identity=30, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24643674, Length=211, Percent_Identity=27.0142180094787, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45550390, Length=192, Percent_Identity=28.6458333333333, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI85724864, Length=198, Percent_Identity=26.2626262626263, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580555, Length=198, Percent_Identity=26.2626262626263, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85816269, Length=198, Percent_Identity=26.2626262626263, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580553, Length=198, Percent_Identity=26.2626262626263, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24648279, Length=208, Percent_Identity=27.8846153846154, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581191, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581189, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581193, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581195, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI62484234, Length=201, Percent_Identity=26.865671641791, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI281363262, Length=219, Percent_Identity=25.5707762557078, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28574259, Length=206, Percent_Identity=24.7572815533981, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24653245, Length=219, Percent_Identity=25.5707762557078, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI28574744, Length=185, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585091, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161078426, Length=207, Percent_Identity=28.0193236714976, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24659289, Length=191, Percent_Identity=25.6544502617801, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585557, Length=188, Percent_Identity=26.5957446808511, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI45552437, Length=188, Percent_Identity=26.5957446808511, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28573571, Length=204, Percent_Identity=24.0196078431373, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28573573, Length=204, Percent_Identity=24.0196078431373, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.25 [C]

Molecular weight: Translated: 26580; Mature: 26580

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVVGVKKKFRRKKVLENITFNVKKGEITALLGLNGVGKSTLLKIIMGLVKQDEGEVLF
CEEEECHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
NGEKLNYKTYENIAFVPDVLNTYGDMKIKDAFEYMSMMYEKWDMDKAYEMLKDFKLTDDL
CCCEECCEECCCEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
KINKLSKGNIARVKLILGFARHPEYLLLDEPFSGIDIFTREKFIESLIGYMDNDIGILLT
EEEEECCCCCEEEEEEEHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
THELKEVENIVDKVVFLSDGNIKIEFYVEDVRENEGLSMVEKIREVHEGE
HHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEVVGVKKKFRRKKVLENITFNVKKGEITALLGLNGVGKSTLLKIIMGLVKQDEGEVLF
CEEEECHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
NGEKLNYKTYENIAFVPDVLNTYGDMKIKDAFEYMSMMYEKWDMDKAYEMLKDFKLTDDL
CCCEECCEECCCEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
KINKLSKGNIARVKLILGFARHPEYLLLDEPFSGIDIFTREKFIESLIGYMDNDIGILLT
EEEEECCCCCEEEEEEEHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
THELKEVENIVDKVVFLSDGNIKIEFYVEDVRENEGLSMVEKIREVHEGE
HHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]