| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311012
Identifier: 18311012
GI number: 18311012
Start: 2320796
End: 2321623
Strand: Reverse
Name: 18311012
Synonym: CPE2030
Alternate gene names: NA
Gene position: 2321623-2320796 (Counterclockwise)
Preceding gene: 18311013
Following gene: 18311011
Centisome position: 76.59
GC content: 25.12
Gene sequence:
>828_bases ATGAAGGTGAGTAAGGGGAATTTTAAAAAGTTAAGTTATCTTTTAAATTTACAGATATTAAGAGATTTAAAAATAACAAT AGGATCAGCTGTTGGAATTATGCTTTTAAACATTGCCTATTTTAGTTATAGTTTAAGTGATGAATTAAAGATTTATTTAG AAAAAACAGAGAATATAGGTGCTATTCAAATGTTTTCGCCTATGGAGCCTTTTAGCAGTTTTGTTAGTAGGATAAATGGT AGGATATTAACTCTTCTAATATTAGGATGCTTTTGTTTATATTGTTGGTATCTATGGCTTGGTGAGTTTAAAGGAGAAAA TAAAAGTGCTTACACTCTTTTAACATTGCCATTGCCTAAAAAGTTTATTATTATATACAAGTTTTTATCAGCGTGTTTTT ATTATTTTTCTTTAGTTTTCTTTCAAATAGTAGCATTACTTATAAATTATATAATATTTAATATTATGGTTCCAACTGAT GCTATAGTAAAAGAAAGTTTAATTACCATATTATCTAGTTCAATAAGTAATTTTTATGGATTGATTCCAGTTAGTTTTGT TAATTTAATAACTAATGGCTTATTTTTTATAGCAATGATAATATTAACTTTTTTATTTGCAATATTAGAGAGAAGTTTTG GAGTAAAGGGTGGAATATTAGGAGTAATATTAGGATGTTCTTTTCTTTTCTTAGTTTTAATCTTCCCAGGAAAGATGGAT TTTTATATGTTCGAAAGATTTATTTGGTTTGTTTTCATATCAATCTTATATAATTTGTTCGGATTGTTTTATTCTAAGTA TTTACTTGAAAAAAAGGTTCATGTGTAA
Upstream 100 bases:
>100_bases GTTGTCTTTTTAAGTGATGGAAATATTAAAATAGAATTTTATGTTGAAGATGTAAGAGAAAATGAAGGATTATCAATGGT AGAGAAAATAAGGGAGGTAC
Downstream 100 bases:
>100_bases GGAGGATTAGAAATTATGAAAAAAAGAGTACCTTTGGTGTTAACAATAATATTTTTAAGTGCATTTATAATTTTTTCTGG AATATTTATTTACATTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIGAIQMFSPMEPFSSFVSRING RILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPKKFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTD AIVKESLITILSSSISNFYGLIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV
Sequences:
>Translated_275_residues MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIGAIQMFSPMEPFSSFVSRING RILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPKKFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTD AIVKESLITILSSSISNFYGLIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV >Mature_275_residues MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIGAIQMFSPMEPFSSFVSRING RILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPKKFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTD AIVKESLITILSSSISNFYGLIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31675; Mature: 31675
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCC AIQMFSPMEPFSSFVSRINGRILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPK EEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCH KFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTDAIVKESLITILSSSISNFYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCC AIQMFSPMEPFSSFVSRINGRILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPK EEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCH KFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTDAIVKESLITILSSSISNFYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA