Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311012

Identifier: 18311012

GI number: 18311012

Start: 2320796

End: 2321623

Strand: Reverse

Name: 18311012

Synonym: CPE2030

Alternate gene names: NA

Gene position: 2321623-2320796 (Counterclockwise)

Preceding gene: 18311013

Following gene: 18311011

Centisome position: 76.59

GC content: 25.12

Gene sequence:

>828_bases
ATGAAGGTGAGTAAGGGGAATTTTAAAAAGTTAAGTTATCTTTTAAATTTACAGATATTAAGAGATTTAAAAATAACAAT
AGGATCAGCTGTTGGAATTATGCTTTTAAACATTGCCTATTTTAGTTATAGTTTAAGTGATGAATTAAAGATTTATTTAG
AAAAAACAGAGAATATAGGTGCTATTCAAATGTTTTCGCCTATGGAGCCTTTTAGCAGTTTTGTTAGTAGGATAAATGGT
AGGATATTAACTCTTCTAATATTAGGATGCTTTTGTTTATATTGTTGGTATCTATGGCTTGGTGAGTTTAAAGGAGAAAA
TAAAAGTGCTTACACTCTTTTAACATTGCCATTGCCTAAAAAGTTTATTATTATATACAAGTTTTTATCAGCGTGTTTTT
ATTATTTTTCTTTAGTTTTCTTTCAAATAGTAGCATTACTTATAAATTATATAATATTTAATATTATGGTTCCAACTGAT
GCTATAGTAAAAGAAAGTTTAATTACCATATTATCTAGTTCAATAAGTAATTTTTATGGATTGATTCCAGTTAGTTTTGT
TAATTTAATAACTAATGGCTTATTTTTTATAGCAATGATAATATTAACTTTTTTATTTGCAATATTAGAGAGAAGTTTTG
GAGTAAAGGGTGGAATATTAGGAGTAATATTAGGATGTTCTTTTCTTTTCTTAGTTTTAATCTTCCCAGGAAAGATGGAT
TTTTATATGTTCGAAAGATTTATTTGGTTTGTTTTCATATCAATCTTATATAATTTGTTCGGATTGTTTTATTCTAAGTA
TTTACTTGAAAAAAAGGTTCATGTGTAA

Upstream 100 bases:

>100_bases
GTTGTCTTTTTAAGTGATGGAAATATTAAAATAGAATTTTATGTTGAAGATGTAAGAGAAAATGAAGGATTATCAATGGT
AGAGAAAATAAGGGAGGTAC

Downstream 100 bases:

>100_bases
GGAGGATTAGAAATTATGAAAAAAAGAGTACCTTTGGTGTTAACAATAATATTTTTAAGTGCATTTATAATTTTTTCTGG
AATATTTATTTACATTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIGAIQMFSPMEPFSSFVSRING
RILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPKKFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTD
AIVKESLITILSSSISNFYGLIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD
FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV

Sequences:

>Translated_275_residues
MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIGAIQMFSPMEPFSSFVSRING
RILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPKKFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTD
AIVKESLITILSSSISNFYGLIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD
FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV
>Mature_275_residues
MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIGAIQMFSPMEPFSSFVSRING
RILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPKKFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTD
AIVKESLITILSSSISNFYGLIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD
FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31675; Mature: 31675

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCC
AIQMFSPMEPFSSFVSRINGRILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPK
EEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCH
KFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTDAIVKESLITILSSSISNFYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH
FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCC
AIQMFSPMEPFSSFVSRINGRILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPK
EEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCH
KFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTDAIVKESLITILSSSISNFYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH
FYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA