Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311011

Identifier: 18311011

GI number: 18311011

Start: 2319602

End: 2320780

Strand: Reverse

Name: 18311011

Synonym: CPE2029

Alternate gene names: NA

Gene position: 2320780-2319602 (Counterclockwise)

Preceding gene: 18311012

Following gene: 18311010

Centisome position: 76.56

GC content: 25.19

Gene sequence:

>1179_bases
ATGAAAAAAAGAGTACCTTTGGTGTTAACAATAATATTTTTAAGTGCATTTATAATTTTTTCTGGAATATTTATTTACAT
TAATTGTTCGCCAATGAAGTTTAAAGATATATATGGAAGTAGAAGTGAACTTGGAGATGTTGATTTAGTTTTTTATAAAG
ATAGAGATATTTTTGAAGAAGAAGTAACTGTTGGAGCTGAAACAATTAATAGAAAAAATATTATTAATGAGAGACGTTTT
GATGGTATTGACGTACTTAAAGATAAGAAGTTTTTTAGAGGAATTTATCCAACAAGAAATACTTTCTTTGAGGATGACGA
TGTAATGGTTGATGTTACTAATATATACGGTAATGGTATTCAAAAGCTTGAAGTTAGATTTAAGGATAAAAAAACTAACA
CTTATGAAACTTTTAAGGTTAAAGTAGATGAATATATTAGAAATAATAATATAGATAAAGTCACTTATAAAGATGGAAAA
ATAAATATATTATTTTCAATGAATTACGAGGAAAATAATATAGTATTTGGGGAAATAAATTTATCTGATAAAAAATTTAA
TATAGTTGATATAATAAATTTAGATGAAGAATTGCATTTAAATGAAGAATTTTCTCATATAAATTCAATACCTCAAGAGT
TTGGAACTTTATTAAATGCTGAAGAAGATACAGTATATTATAAATTAAACGAACTTGATAAGACCGATAAGAGGGGAATA
TATAGTGATGAGAGTATTATTGAATTAAATGTAAATACTAGAGAAATAAAAAGATATAATCCTGATGATAAAATAAGAAA
TGAAATAAAGGAATCTTCCTTTGATCCAAATGGAAAAGGTGGTACAATGTTTGAGGCTTATGGTGAAATATATATTACCC
AGACCTCAGATGAGAAGACTTCAGTATTAGTGTTTGACACTAAAACAAAAGAGTTTAAATTTTATAAAGATATTGTAGAA
AATGAAAGATTAAAGAGATATGGGGTAGAAGTTAGAGATTTAGGTAAATTTATAATTGTAGGAAATAAAGTTATAGCTAA
TTTTGTTAATGTTAGAGATGATGGTTTTGTAAGTGGAGCTTATTTATCAGTTATAGATATACCTAGTAAAAATCCAGTTT
ATATAGGTGAGTTAGAATGTGGATATTTAAGTGACATTAAGATAACAGGAGGTAAATAA

Upstream 100 bases:

>100_bases
TTGGTTTGTTTTCATATCAATCTTATATAATTTGTTCGGATTGTTTTATTCTAAGTATTTACTTGAAAAAAAGGTTCATG
TGTAAGGAGGATTAGAAATT

Downstream 100 bases:

>100_bases
AATGTTTTTTGAAGTAAACGATAGAGAACCAATTTATCTCCAAATAATAAGACATATAAAACAATCTTTAGTTATTGGGA
GTTTAAAGCCTGGGGATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKKRVPLVLTIIFLSAFIIFSGIFIYINCSPMKFKDIYGSRSELGDVDLVFYKDRDIFEEEVTVGAETINRKNIINERRF
DGIDVLKDKKFFRGIYPTRNTFFEDDDVMVDVTNIYGNGIQKLEVRFKDKKTNTYETFKVKVDEYIRNNNIDKVTYKDGK
INILFSMNYEENNIVFGEINLSDKKFNIVDIINLDEELHLNEEFSHINSIPQEFGTLLNAEEDTVYYKLNELDKTDKRGI
YSDESIIELNVNTREIKRYNPDDKIRNEIKESSFDPNGKGGTMFEAYGEIYITQTSDEKTSVLVFDTKTKEFKFYKDIVE
NERLKRYGVEVRDLGKFIIVGNKVIANFVNVRDDGFVSGAYLSVIDIPSKNPVYIGELECGYLSDIKITGGK

Sequences:

>Translated_392_residues
MKKRVPLVLTIIFLSAFIIFSGIFIYINCSPMKFKDIYGSRSELGDVDLVFYKDRDIFEEEVTVGAETINRKNIINERRF
DGIDVLKDKKFFRGIYPTRNTFFEDDDVMVDVTNIYGNGIQKLEVRFKDKKTNTYETFKVKVDEYIRNNNIDKVTYKDGK
INILFSMNYEENNIVFGEINLSDKKFNIVDIINLDEELHLNEEFSHINSIPQEFGTLLNAEEDTVYYKLNELDKTDKRGI
YSDESIIELNVNTREIKRYNPDDKIRNEIKESSFDPNGKGGTMFEAYGEIYITQTSDEKTSVLVFDTKTKEFKFYKDIVE
NERLKRYGVEVRDLGKFIIVGNKVIANFVNVRDDGFVSGAYLSVIDIPSKNPVYIGELECGYLSDIKITGGK
>Mature_392_residues
MKKRVPLVLTIIFLSAFIIFSGIFIYINCSPMKFKDIYGSRSELGDVDLVFYKDRDIFEEEVTVGAETINRKNIINERRF
DGIDVLKDKKFFRGIYPTRNTFFEDDDVMVDVTNIYGNGIQKLEVRFKDKKTNTYETFKVKVDEYIRNNNIDKVTYKDGK
INILFSMNYEENNIVFGEINLSDKKFNIVDIINLDEELHLNEEFSHINSIPQEFGTLLNAEEDTVYYKLNELDKTDKRGI
YSDESIIELNVNTREIKRYNPDDKIRNEIKESSFDPNGKGGTMFEAYGEIYITQTSDEKTSVLVFDTKTKEFKFYKDIVE
NERLKRYGVEVRDLGKFIIVGNKVIANFVNVRDDGFVSGAYLSVIDIPSKNPVYIGELECGYLSDIKITGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45505; Mature: 45505

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRVPLVLTIIFLSAFIIFSGIFIYINCSPMKFKDIYGSRSELGDVDLVFYKDRDIFEE
CCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEHHHCCCCCCCCCEEEEEECCCCCCHH
EVTVGAETINRKNIINERRFDGIDVLKDKKFFRGIYPTRNTFFEDDDVMVDVTNIYGNGI
HHHHCHHHCCHHHCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCE
QKLEVRFKDKKTNTYETFKVKVDEYIRNNNIDKVTYKDGKINILFSMNYEENNIVFGEIN
EEEEEEEECCCCCCEEEEEEEEHHHHHCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEE
LSDKKFNIVDIINLDEELHLNEEFSHINSIPQEFGTLLNAEEDTVYYKLNELDKTDKRGI
CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
YSDESIIELNVNTREIKRYNPDDKIRNEIKESSFDPNGKGGTMFEAYGEIYITQTSDEKT
CCCCCEEEEECCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECEEEEEECCCCCE
SVLVFDTKTKEFKFYKDIVENERLKRYGVEVRDLGKFIIVGNKVIANFVNVRDDGFVSGA
EEEEEECCCCHHHHHHHHHCCCHHHHHCCCHHHCCCEEEECCHHHHHHHCCCCCCEECCE
YLSVIDIPSKNPVYIGELECGYLSDIKITGGK
EEEEEECCCCCCEEEEEECCCEEEEEEEECCC
>Mature Secondary Structure
MKKRVPLVLTIIFLSAFIIFSGIFIYINCSPMKFKDIYGSRSELGDVDLVFYKDRDIFEE
CCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEHHHCCCCCCCCCEEEEEECCCCCCHH
EVTVGAETINRKNIINERRFDGIDVLKDKKFFRGIYPTRNTFFEDDDVMVDVTNIYGNGI
HHHHCHHHCCHHHCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCE
QKLEVRFKDKKTNTYETFKVKVDEYIRNNNIDKVTYKDGKINILFSMNYEENNIVFGEIN
EEEEEEEECCCCCCEEEEEEEEHHHHHCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEE
LSDKKFNIVDIINLDEELHLNEEFSHINSIPQEFGTLLNAEEDTVYYKLNELDKTDKRGI
CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
YSDESIIELNVNTREIKRYNPDDKIRNEIKESSFDPNGKGGTMFEAYGEIYITQTSDEKT
CCCCCEEEEECCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECEEEEEECCCCCE
SVLVFDTKTKEFKFYKDIVENERLKRYGVEVRDLGKFIIVGNKVIANFVNVRDDGFVSGA
EEEEEECCCCHHHHHHHHHCCCHHHHHCCCHHHCCCEEEECCHHHHHHHCCCCCCEECCE
YLSVIDIPSKNPVYIGELECGYLSDIKITGGK
EEEEEECCCCCCEEEEEECCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA