| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310948
Identifier: 18310948
GI number: 18310948
Start: 2255183
End: 2256157
Strand: Reverse
Name: 18310948
Synonym: CPE1966
Alternate gene names: NA
Gene position: 2256157-2255183 (Counterclockwise)
Preceding gene: 18310954
Following gene: 18310947
Centisome position: 74.43
GC content: 28.21
Gene sequence:
>975_bases ATGGAGAGTATGACCGATGTAGGCAAAACAATATCTTTTCCAAGGTATAAGTGGGATAGTTTTTATAAAAAGATGGTGAG TCCTACAGATGGAAGAAATCTGTATTGCTTGGTTTTTGATTATAATGATAATCCAGTGGGGGAAGCAAGCTTTCATGGAT ATGACTCTATAACTAAAACTGCTAGGTTAAATGTTAGGATAGAAAATTCACATAGGGGAAAGGGCTACGGAAGTGAAGCG GTACATCTTATCTTAGAATGCTTTTTCAATGAATTTGGTGGCTTATATATGCTAGATACGGTTTCGTTAGATGAGAACAG AGAAAGACTTGAAAAAATTGGTTTCAAGATTATGTATAAAAATAAAGATGGTTATTCATATAGATTATCTAAGGATGATT TTAATAGTCAAATCAAAGACTTAAAAGAGAGAAAGTTTGGAATATTTATTTATGATAAGATGGTAGTAAGCACAGTAATA TCTTTCTTAGAAATTTTTCATGATATAAATAAATCATTAGATAAAGAAATAATTTCAGTGGAATTAGTAGGTACAAAAAA TAATATAATAAAAGATGGAATGTATGATATAAAGTTTGAAAATGTAAAATCTATAGAGGAAGTAGATCTAGATGTTATAA TTGTTCCAGGAAGTAAGAGTAATAAGTTCTATGAAAATGAGGAATTTGAAAAACTCTTAAACAATATAAACGGATGTGAA ACTGTCTGCGTTCTAGGAAATAGTATAATTCCATTTATAAAAAATAAATTTTTAAGAGGTTTAAAAGCGTATTATTCTAA GGAGTGGGTTGAATTTATAAAGGAAGAAATCGCCTTAACATCTTATTCTGATGAAGATATTATTGATAATGGAAGACTTA TAATGGTTAAGAAAAAATCCTGTGAAATAGAAGGAATAAAATACATAATTAAAAAGTTGTTTGGAGAATCTGTATTAAAT AGATTTGATTTATAG
Upstream 100 bases:
>100_bases GATACAAAAAAGAAACTGTTATAGGAGAGAGGGAAGAAAAGTTTATATAAGAACACCATATTTAGAAGAACTAGGGTATA CTGAAAAGCTATGGGGAGAT
Downstream 100 bases:
>100_bases ATTTGATGCTATATTTTATAGTGTTATGAATAGGAGTTGTTTATTATATGATAAACATAAAATTAGATGAAGACAAAAGA GGAAAAGTTATATTTAGAGC
Product: GNAT family acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase Gnat Family; Acetyltransferase Gnat Family Protein
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MESMTDVGKTISFPRYKWDSFYKKMVSPTDGRNLYCLVFDYNDNPVGEASFHGYDSITKTARLNVRIENSHRGKGYGSEA VHLILECFFNEFGGLYMLDTVSLDENRERLEKIGFKIMYKNKDGYSYRLSKDDFNSQIKDLKERKFGIFIYDKMVVSTVI SFLEIFHDINKSLDKEIISVELVGTKNNIIKDGMYDIKFENVKSIEEVDLDVIIVPGSKSNKFYENEEFEKLLNNINGCE TVCVLGNSIIPFIKNKFLRGLKAYYSKEWVEFIKEEIALTSYSDEDIIDNGRLIMVKKKSCEIEGIKYIIKKLFGESVLN RFDL
Sequences:
>Translated_324_residues MESMTDVGKTISFPRYKWDSFYKKMVSPTDGRNLYCLVFDYNDNPVGEASFHGYDSITKTARLNVRIENSHRGKGYGSEA VHLILECFFNEFGGLYMLDTVSLDENRERLEKIGFKIMYKNKDGYSYRLSKDDFNSQIKDLKERKFGIFIYDKMVVSTVI SFLEIFHDINKSLDKEIISVELVGTKNNIIKDGMYDIKFENVKSIEEVDLDVIIVPGSKSNKFYENEEFEKLLNNINGCE TVCVLGNSIIPFIKNKFLRGLKAYYSKEWVEFIKEEIALTSYSDEDIIDNGRLIMVKKKSCEIEGIKYIIKKLFGESVLN RFDL >Mature_324_residues MESMTDVGKTISFPRYKWDSFYKKMVSPTDGRNLYCLVFDYNDNPVGEASFHGYDSITKTARLNVRIENSHRGKGYGSEA VHLILECFFNEFGGLYMLDTVSLDENRERLEKIGFKIMYKNKDGYSYRLSKDDFNSQIKDLKERKFGIFIYDKMVVSTVI SFLEIFHDINKSLDKEIISVELVGTKNNIIKDGMYDIKFENVKSIEEVDLDVIIVPGSKSNKFYENEEFEKLLNNINGCE TVCVLGNSIIPFIKNKFLRGLKAYYSKEWVEFIKEEIALTSYSDEDIIDNGRLIMVKKKSCEIEGIKYIIKKLFGESVLN RFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37632; Mature: 37632
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESMTDVGKTISFPRYKWDSFYKKMVSPTDGRNLYCLVFDYNDNPVGEASFHGYDSITKT CCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCE ARLNVRIENSHRGKGYGSEAVHLILECFFNEFGGLYMLDTVSLDENRERLEKIGFKIMYK EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCEEEEEE NKDGYSYRLSKDDFNSQIKDLKERKFGIFIYDKMVVSTVISFLEIFHDINKSLDKEIISV CCCCCEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE ELVGTKNNIIKDGMYDIKFENVKSIEEVDLDVIIVPGSKSNKFYENEEFEKLLNNINGCE EEECCCCCHHCCCCCEEEECCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHH TVCVLGNSIIPFIKNKFLRGLKAYYSKEWVEFIKEEIALTSYSDEDIIDNGRLIMVKKKS EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC CEIEGIKYIIKKLFGESVLNRFDL CCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MESMTDVGKTISFPRYKWDSFYKKMVSPTDGRNLYCLVFDYNDNPVGEASFHGYDSITKT CCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCE ARLNVRIENSHRGKGYGSEAVHLILECFFNEFGGLYMLDTVSLDENRERLEKIGFKIMYK EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCEEEEEE NKDGYSYRLSKDDFNSQIKDLKERKFGIFIYDKMVVSTVISFLEIFHDINKSLDKEIISV CCCCCEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE ELVGTKNNIIKDGMYDIKFENVKSIEEVDLDVIIVPGSKSNKFYENEEFEKLLNNINGCE EEECCCCCHHCCCCCEEEECCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHH TVCVLGNSIIPFIKNKFLRGLKAYYSKEWVEFIKEEIALTSYSDEDIIDNGRLIMVKKKS EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC CEIEGIKYIIKKLFGESVLNRFDL CCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA