Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310947

Identifier: 18310947

GI number: 18310947

Start: 2254743

End: 2255135

Strand: Reverse

Name: 18310947

Synonym: CPE1965

Alternate gene names: NA

Gene position: 2255135-2254743 (Counterclockwise)

Preceding gene: 18310948

Following gene: 18310943

Centisome position: 74.39

GC content: 24.94

Gene sequence:

>393_bases
ATGATAAACATAAAATTAGATGAAGACAAAAGAGGAAAAGTTATATTTAGAGCAAATATAGATGAGTGTCATAAAGATAA
CAGGATATTAAAAAGAGCATTGTTTGAGAGTAGAGTAGTAAACAATGAGTTTAAATATAATATACCAATGAAATATTTTT
GGCCAATAATAAATAATGTTCATAAAGAATTAATAAGTTTAAGTGAGGATAGTAGACTTGAAGTTTTAGAATTTTCAGAT
GAATATGAAGAAGTTTATTATTATAATTATAAAGCTACACCAGCTTATATGAAGAAATGGAGAGAGGAAGGTTGTCCTCC
GATTTTTAAAATAACAATAAATCCTAAGGATTTAAGTGTGGAGAAAAAAGTTATATTTGAAAGATTAATATAA

Upstream 100 bases:

>100_bases
ACATAATTAAAAAGTTGTTTGGAGAATCTGTATTAAATAGATTTGATTTATAGATTTGATGCTATATTTTATAGTGTTAT
GAATAGGAGTTGTTTATTAT

Downstream 100 bases:

>100_bases
AAAAGCTTTGAGAAAAAAATCTCAAAGCTTTTTTTATTATTGCCATTCTTCTACATTTTCTAATCCAGGAATAGAAGATG
CTTTAAATACTGGCTCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MINIKLDEDKRGKVIFRANIDECHKDNRILKRALFESRVVNNEFKYNIPMKYFWPIINNVHKELISLSEDSRLEVLEFSD
EYEEVYYYNYKATPAYMKKWREEGCPPIFKITINPKDLSVEKKVIFERLI

Sequences:

>Translated_130_residues
MINIKLDEDKRGKVIFRANIDECHKDNRILKRALFESRVVNNEFKYNIPMKYFWPIINNVHKELISLSEDSRLEVLEFSD
EYEEVYYYNYKATPAYMKKWREEGCPPIFKITINPKDLSVEKKVIFERLI
>Mature_130_residues
MINIKLDEDKRGKVIFRANIDECHKDNRILKRALFESRVVNNEFKYNIPMKYFWPIINNVHKELISLSEDSRLEVLEFSD
EYEEVYYYNYKATPAYMKKWREEGCPPIFKITINPKDLSVEKKVIFERLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15757; Mature: 15757

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIKLDEDKRGKVIFRANIDECHKDNRILKRALFESRVVNNEFKYNIPMKYFWPIINNV
CEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH
HKELISLSEDSRLEVLEFSDEYEEVYYYNYKATPAYMKKWREEGCPPIFKITINPKDLSV
HHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCH
EKKVIFERLI
HHHHHHHHCC
>Mature Secondary Structure
MINIKLDEDKRGKVIFRANIDECHKDNRILKRALFESRVVNNEFKYNIPMKYFWPIINNV
CEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH
HKELISLSEDSRLEVLEFSDEYEEVYYYNYKATPAYMKKWREEGCPPIFKITINPKDLSV
HHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCH
EKKVIFERLI
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA