Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is recX [H]

Identifier: 18310905

GI number: 18310905

Start: 2204030

End: 2204668

Strand: Reverse

Name: recX [H]

Synonym: CPE1923

Alternate gene names: 18310905

Gene position: 2204668-2204030 (Counterclockwise)

Preceding gene: 18310906

Following gene: 18310904

Centisome position: 72.73

GC content: 25.67

Gene sequence:

>639_bases
ATGGGAAAAATAACAAGTATAGAAGTTCAAAAGAGAAATGTAAATAGAGTAAATGTTTATGTGGATGAAGCCTTTACCTT
TGCTTGTGATGCTGAACTTATATATAAACAAGGAATACAAAAGGATTCTATAATAGATATTGAAGCAATCAAGGAAATTG
TAAAAGAAGATGAATTTATAAAATGTAAAAATTCTGCATTAAGAACAGTTGAGAAAACCTATAAAACAGAAAAGGAATTA
AGAGATAAACTTGCTGAAAAAGGTTTTGAAGAGGATACAATTAAAAGAGCCATAGAATTTTTAAAGGAATACAATCTTTT
AAATGATGAAAAATATGCAGAGATGTATATAAAGGATAGGCTTAGAAGTCAGGGAAGAAATAAAATAAAATATGCTCTTA
TAAGAAAGGGCGTTAGTGAAGATATACTTTTAGATAAATTATCTAATATTGATACTGAGGATGAAAATGATACTGCTTTT
AAGTTAGCAGAAAAGAAATATAATATACTAAAGAAAAAAGAAAGTGATAAATATAAATTATCTCAAAAATTATTTAGATT
TCTTTTATCTAAAGGATATGATTATGACTGCTGTAATAGCATAGTTAGAAGATTAACAAATAATGAATATATGGAGTAG

Upstream 100 bases:

>100_bases
AAGAATTAGAAACTTTAACTGGGGAAGATATCTATAGGGTTTGTAATAAATATTTGAATAAGCCTACTATACACATATTA
AAACCAATGGAGTAGATAAA

Downstream 100 bases:

>100_bases
ATAAAATGAATTTTAACTTAGTAGATATAATTATAGTTTGTTCTTTTATACTACCATTAGTAGTTGCTTACAAAAGAAAG
TTTAATATTATTAGAATAAA

Product: recombination regulator RecX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFIKCKNSALRTVEKTYKTEKEL
RDKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDRLRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAF
KLAEKKYNILKKKESDKYKLSQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME

Sequences:

>Translated_212_residues
MGKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFIKCKNSALRTVEKTYKTEKEL
RDKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDRLRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAF
KLAEKKYNILKKKESDKYKLSQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME
>Mature_211_residues
GKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFIKCKNSALRTVEKTYKTEKELR
DKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDRLRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAFK
LAEKKYNILKKKESDKYKLSQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME

Specific function: Modulates recA activity [H]

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003783 [H]

Pfam domain/function: PF02631 RecX [H]

EC number: NA

Molecular weight: Translated: 25084; Mature: 24953

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFI
CCCCCEEEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
KCKNSALRTVEKTYKTEKELRDKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAFKLAEKKYNILKKKESDKYKL
HHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
SQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFI
CCCCEEEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
KCKNSALRTVEKTYKTEKELRDKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAFKLAEKKYNILKKKESDKYKL
HHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
SQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA