| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is recX [H]
Identifier: 18310905
GI number: 18310905
Start: 2204030
End: 2204668
Strand: Reverse
Name: recX [H]
Synonym: CPE1923
Alternate gene names: 18310905
Gene position: 2204668-2204030 (Counterclockwise)
Preceding gene: 18310906
Following gene: 18310904
Centisome position: 72.73
GC content: 25.67
Gene sequence:
>639_bases ATGGGAAAAATAACAAGTATAGAAGTTCAAAAGAGAAATGTAAATAGAGTAAATGTTTATGTGGATGAAGCCTTTACCTT TGCTTGTGATGCTGAACTTATATATAAACAAGGAATACAAAAGGATTCTATAATAGATATTGAAGCAATCAAGGAAATTG TAAAAGAAGATGAATTTATAAAATGTAAAAATTCTGCATTAAGAACAGTTGAGAAAACCTATAAAACAGAAAAGGAATTA AGAGATAAACTTGCTGAAAAAGGTTTTGAAGAGGATACAATTAAAAGAGCCATAGAATTTTTAAAGGAATACAATCTTTT AAATGATGAAAAATATGCAGAGATGTATATAAAGGATAGGCTTAGAAGTCAGGGAAGAAATAAAATAAAATATGCTCTTA TAAGAAAGGGCGTTAGTGAAGATATACTTTTAGATAAATTATCTAATATTGATACTGAGGATGAAAATGATACTGCTTTT AAGTTAGCAGAAAAGAAATATAATATACTAAAGAAAAAAGAAAGTGATAAATATAAATTATCTCAAAAATTATTTAGATT TCTTTTATCTAAAGGATATGATTATGACTGCTGTAATAGCATAGTTAGAAGATTAACAAATAATGAATATATGGAGTAG
Upstream 100 bases:
>100_bases AAGAATTAGAAACTTTAACTGGGGAAGATATCTATAGGGTTTGTAATAAATATTTGAATAAGCCTACTATACACATATTA AAACCAATGGAGTAGATAAA
Downstream 100 bases:
>100_bases ATAAAATGAATTTTAACTTAGTAGATATAATTATAGTTTGTTCTTTTATACTACCATTAGTAGTTGCTTACAAAAGAAAG TTTAATATTATTAGAATAAA
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MGKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFIKCKNSALRTVEKTYKTEKEL RDKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDRLRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAF KLAEKKYNILKKKESDKYKLSQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME
Sequences:
>Translated_212_residues MGKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFIKCKNSALRTVEKTYKTEKEL RDKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDRLRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAF KLAEKKYNILKKKESDKYKLSQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME >Mature_211_residues GKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFIKCKNSALRTVEKTYKTEKELR DKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDRLRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAFK LAEKKYNILKKKESDKYKLSQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 25084; Mature: 24953
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFI CCCCCEEEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH KCKNSALRTVEKTYKTEKELRDKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAFKLAEKKYNILKKKESDKYKL HHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH SQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKITSIEVQKRNVNRVNVYVDEAFTFACDAELIYKQGIQKDSIIDIEAIKEIVKEDEFI CCCCEEEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH KCKNSALRTVEKTYKTEKELRDKLAEKGFEEDTIKRAIEFLKEYNLLNDEKYAEMYIKDR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LRSQGRNKIKYALIRKGVSEDILLDKLSNIDTEDENDTAFKLAEKKYNILKKKESDKYKL HHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH SQKLFRFLLSKGYDYDCCNSIVRRLTNNEYME HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA