| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310904
Identifier: 18310904
GI number: 18310904
Start: 2202849
End: 2204024
Strand: Reverse
Name: 18310904
Synonym: CPE1922
Alternate gene names: NA
Gene position: 2204024-2202849 (Counterclockwise)
Preceding gene: 18310905
Following gene: 18310903
Centisome position: 72.71
GC content: 27.72
Gene sequence:
>1176_bases ATGAATTTTAACTTAGTAGATATAATTATAGTTTGTTCTTTTATACTACCATTAGTAGTTGCTTACAAAAGAAAGTTTAA TATTATTAGAATAAAAAATAGTATAGAGGAATTAGGAGGATATATATCCTTTTTTCTTGCTTTATACTTAAGTTTTATAG CTATAAAAAAGATAGATATAATAGAGAGGATGTTTTCGATCGTAGTTGTTGAATTCAATAATATTATATCTAACTTTAAT ATTTCACCACAGGTTATAATAATATTCATAGTATTAGCTCTTACCCTTGTAATTTATTTTATAGTAAAAGTTATACTTAA AATATTTAGTTTTATTATTATAAATCCAATACTCAGATGGTTAAAAAAAGCAGAGTCTAGAAGGGGCAAGGGATTTGGTA AAGTTGCAGCTTTAATAATAAATATACCAAAGTCTCTTTTTTATATGGCAGTAATTGCTTTAGTCATAGTTATTCTAGGA AGCAATGGTTTCTTAGGAGAGAAAATGGAAGGCATGACTTTAGCTTCAAAGGCTTATGAGGTTATAAATAGTAATAAGTA CTATGCTGCTTTAAATAAAGAATATGAAGCTTTTCATGATGAATATAAAGATGTTATTAGCAAAAACATAGATTCTGTAG TTGAAAGTAATAAAGAGACAAAGAGTGAAAAAGTGGTTGAAAGTAATAGAAATGTTATAAATCTTTATAATGGTGTAACT TTAGAACAAGGTATAAAATCAAATGAAGCTATTAATAAAAAAGCTAAGGAACTTACTAAAAATGCAAAAAGTAGTAGAGA AAAAGCTAAAAGAATATATACTTGGATAAGTGAAAATATTAATTATGATGATAATAAAGCTGAAAATATAAGCGAGAAAA CTTCTGAGTATAAGTCTGGAGCTATTGAAGCCTTTGAAACTAGAAAAGGAATATGCTTTGATTATTCTTGTCTTTATGTT GCTATGGCAAGAGAAGCGGGGCTTAAAGTTAGAATTGTAACTGGAGAAGGATTCAATGGAAAGGAATGGGGACCACATTC TTGGAATGAGGTTTATTTACCAGAAAAAAATCAATGGATAACTGTTGATCCTACCTTTGGTAAAGCTGGAAACTATTTTG ATAGTAAGAAAAATAGTGAATCACACAGAGATGGAAAAATAGTTGGTGAATGGTAA
Upstream 100 bases:
>100_bases AAAAATTATTTAGATTTCTTTTATCTAAAGGATATGATTATGACTGCTGTAATAGCATAGTTAGAAGATTAACAAATAAT GAATATATGGAGTAGATAAA
Downstream 100 bases:
>100_bases GATAATAATTCATATGAAATACAATAAAACTTACAAATATATTTTGGAGAAAATAAAATTTCTTCTAATACTATTTGTAA GTTTTATTTTGGTTTTAGGG
Product: transglutaminase domain protein
Products: NA
Alternate protein names: Transglutaminase Domain-Containing Protein; Transglutaminase-Like Cysteine Protease; Transglutaminase-Like Family Protein; Cysteine Protease; Transglutaminase Family Protein; Membrane-Bound Protein; Copper Amine Oxidase Domain Protein; Transglutaminase-Like Protein
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNFNLVDIIIVCSFILPLVVAYKRKFNIIRIKNSIEELGGYISFFLALYLSFIAIKKIDIIERMFSIVVVEFNNIISNFN ISPQVIIIFIVLALTLVIYFIVKVILKIFSFIIINPILRWLKKAESRRGKGFGKVAALIINIPKSLFYMAVIALVIVILG SNGFLGEKMEGMTLASKAYEVINSNKYYAALNKEYEAFHDEYKDVISKNIDSVVESNKETKSEKVVESNRNVINLYNGVT LEQGIKSNEAINKKAKELTKNAKSSREKAKRIYTWISENINYDDNKAENISEKTSEYKSGAIEAFETRKGICFDYSCLYV AMAREAGLKVRIVTGEGFNGKEWGPHSWNEVYLPEKNQWITVDPTFGKAGNYFDSKKNSESHRDGKIVGEW
Sequences:
>Translated_391_residues MNFNLVDIIIVCSFILPLVVAYKRKFNIIRIKNSIEELGGYISFFLALYLSFIAIKKIDIIERMFSIVVVEFNNIISNFN ISPQVIIIFIVLALTLVIYFIVKVILKIFSFIIINPILRWLKKAESRRGKGFGKVAALIINIPKSLFYMAVIALVIVILG SNGFLGEKMEGMTLASKAYEVINSNKYYAALNKEYEAFHDEYKDVISKNIDSVVESNKETKSEKVVESNRNVINLYNGVT LEQGIKSNEAINKKAKELTKNAKSSREKAKRIYTWISENINYDDNKAENISEKTSEYKSGAIEAFETRKGICFDYSCLYV AMAREAGLKVRIVTGEGFNGKEWGPHSWNEVYLPEKNQWITVDPTFGKAGNYFDSKKNSESHRDGKIVGEW >Mature_391_residues MNFNLVDIIIVCSFILPLVVAYKRKFNIIRIKNSIEELGGYISFFLALYLSFIAIKKIDIIERMFSIVVVEFNNIISNFN ISPQVIIIFIVLALTLVIYFIVKVILKIFSFIIINPILRWLKKAESRRGKGFGKVAALIINIPKSLFYMAVIALVIVILG SNGFLGEKMEGMTLASKAYEVINSNKYYAALNKEYEAFHDEYKDVISKNIDSVVESNKETKSEKVVESNRNVINLYNGVT LEQGIKSNEAINKKAKELTKNAKSSREKAKRIYTWISENINYDDNKAENISEKTSEYKSGAIEAFETRKGICFDYSCLYV AMAREAGLKVRIVTGEGFNGKEWGPHSWNEVYLPEKNQWITVDPTFGKAGNYFDSKKNSESHRDGKIVGEW
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44533; Mature: 44533
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNLVDIIIVCSFILPLVVAYKRKFNIIRIKNSIEELGGYISFFLALYLSFIAIKKIDI CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERMFSIVVVEFNNIISNFNISPQVIIIFIVLALTLVIYFIVKVILKIFSFIIINPILRW HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKKAESRRGKGFGKVAALIINIPKSLFYMAVIALVIVILGSNGFLGEKMEGMTLASKAYE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VINSNKYYAALNKEYEAFHDEYKDVISKNIDSVVESNKETKSEKVVESNRNVINLYNGVT HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCC LEQGIKSNEAINKKAKELTKNAKSSREKAKRIYTWISENINYDDNKAENISEKTSEYKSG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC AIEAFETRKGICFDYSCLYVAMAREAGLKVRIVTGEGFNGKEWGPHSWNEVYLPEKNQWI CHHHHHCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCEE TVDPTFGKAGNYFDSKKNSESHRDGKIVGEW EECCCCCCCCCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure MNFNLVDIIIVCSFILPLVVAYKRKFNIIRIKNSIEELGGYISFFLALYLSFIAIKKIDI CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERMFSIVVVEFNNIISNFNISPQVIIIFIVLALTLVIYFIVKVILKIFSFIIINPILRW HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKKAESRRGKGFGKVAALIINIPKSLFYMAVIALVIVILGSNGFLGEKMEGMTLASKAYE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VINSNKYYAALNKEYEAFHDEYKDVISKNIDSVVESNKETKSEKVVESNRNVINLYNGVT HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCC LEQGIKSNEAINKKAKELTKNAKSSREKAKRIYTWISENINYDDNKAENISEKTSEYKSG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC AIEAFETRKGICFDYSCLYVAMAREAGLKVRIVTGEGFNGKEWGPHSWNEVYLPEKNQWI CHHHHHCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCEE TVDPTFGKAGNYFDSKKNSESHRDGKIVGEW EECCCCCCCCCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA