Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310898

Identifier: 18310898

GI number: 18310898

Start: 2194709

End: 2195203

Strand: Direct

Name: 18310898

Synonym: CPE1916

Alternate gene names: NA

Gene position: 2194709-2195203 (Clockwise)

Preceding gene: 18310896

Following gene: 18310902

Centisome position: 72.4

GC content: 29.9

Gene sequence:

>495_bases
ATGAATAATTCAGCTGAATATTTTATAAAATCATTAAATATGACAGCACATCCTGAAGGTGGATATTTTAAAGAATCCTT
TATTTCACCTAGCAAACTTGCTCCAAATACTTTACATATAAATGAAGAGCGTTTACTTTGGACTAGCATATATTTCTTAT
TAAGAACTGGAGAAGTTTCAAATTTTCATAGATTAAAATCTGATGAAATGTGGTATTTCCATGCTGGAGAATCCTTAACA
ATTTATATGATAAGCCCAAATGGTGAACTTATAGAAAAACAACTAGGATTAAACATAGAAAAAGGAGAAACTCCTCAAGT
TTTAGTTCCTAAGGATTATATATTTGGTTCTGCCATGAATAATGAAGGCTTCTCCCTAGTTGGTTGTATGGTAGCACCTG
GCTTTGACTTTAAAGATTTTGAGTTATTTGAAAGAGAAGATTTGCTTGAAAAATATCCAAAGTACAAAGAAGTAATAGAA
AAATTAACTAGATAA

Upstream 100 bases:

>100_bases
TGTTATTATATGCATATTTTAAATTTATATTTGTAATTATACTATTTATGATTTATGATTAAACATGTTTAGAAAAATTA
TTTGAAAGGTGGTTTTTAAT

Downstream 100 bases:

>100_bases
AAAAACTTTTATAAAAATAAAAAACTTACAAATTTACTTAAAGAGTTACCCTATTTCTTTAAGAATTATTTGTAAGTTTT
TTTATTAGCTTTTAATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNNSAEYFIKSLNMTAHPEGGYFKESFISPSKLAPNTLHINEERLLWTSIYFLLRTGEVSNFHRLKSDEMWYFHAGESLT
IYMISPNGELIEKQLGLNIEKGETPQVLVPKDYIFGSAMNNEGFSLVGCMVAPGFDFKDFELFEREDLLEKYPKYKEVIE
KLTR

Sequences:

>Translated_164_residues
MNNSAEYFIKSLNMTAHPEGGYFKESFISPSKLAPNTLHINEERLLWTSIYFLLRTGEVSNFHRLKSDEMWYFHAGESLT
IYMISPNGELIEKQLGLNIEKGETPQVLVPKDYIFGSAMNNEGFSLVGCMVAPGFDFKDFELFEREDLLEKYPKYKEVIE
KLTR
>Mature_164_residues
MNNSAEYFIKSLNMTAHPEGGYFKESFISPSKLAPNTLHINEERLLWTSIYFLLRTGEVSNFHRLKSDEMWYFHAGESLT
IYMISPNGELIEKQLGLNIEKGETPQVLVPKDYIFGSAMNNEGFSLVGCMVAPGFDFKDFELFEREDLLEKYPKYKEVIE
KLTR

Specific function: Unknown

COG id: COG3542

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18993; Mature: 18993

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSAEYFIKSLNMTAHPEGGYFKESFISPSKLAPNTLHINEERLLWTSIYFLLRTGEVS
CCCHHHHHHEECCCEECCCCCCHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCC
NFHRLKSDEMWYFHAGESLTIYMISPNGELIEKQLGLNIEKGETPQVLVPKDYIFGSAMN
CHHHCCCCCEEEEECCCEEEEEEECCCCHHHHHHHCCEECCCCCCEEEECCHHEECCCCC
NEGFSLVGCMVAPGFDFKDFELFEREDLLEKYPKYKEVIEKLTR
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MNNSAEYFIKSLNMTAHPEGGYFKESFISPSKLAPNTLHINEERLLWTSIYFLLRTGEVS
CCCHHHHHHEECCCEECCCCCCHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCC
NFHRLKSDEMWYFHAGESLTIYMISPNGELIEKQLGLNIEKGETPQVLVPKDYIFGSAMN
CHHHCCCCCEEEEECCCEEEEEEECCCCHHHHHHHCCEECCCCCCEEEECCHHEECCCCC
NEGFSLVGCMVAPGFDFKDFELFEREDLLEKYPKYKEVIEKLTR
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA