Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310894

Identifier: 18310894

GI number: 18310894

Start: 2190592

End: 2191122

Strand: Direct

Name: 18310894

Synonym: CPE1912

Alternate gene names: NA

Gene position: 2190592-2191122 (Clockwise)

Preceding gene: 18310891

Following gene: 18310895

Centisome position: 72.26

GC content: 25.05

Gene sequence:

>531_bases
ATGTATGATAGCACATTAGAATTAGCTGAGAATAAATTACTTCTTTTATATATAATAAAGTCAATAAAATATCCTATATC
TAACACACAATTAACAGATATAGTTTTAGAAAATAGTTTTATAAATTATTTTATGTTACAGCAATATGTATCTGAATTAA
TTTCTTCTGAGTTCTTAGAATATAAAACTCAAGATGATGATAAAGAAATCATAGTACTTACGGAAAAGGGAGATAAGGTA
CTATTCTTCTTTAAAGATAGAATATCTCCAAACAAATTAAACCTTATAGATGAATATGTACGCAAGCATGTTGAAAAAAT
AAAAAAAGAATTAAGTATATCTGCTGATTATACTGTTGGAGAAGACAGTTCTTTCATAGTAAATCTTAAAGCAATAGAAA
ATAATACTATTCTAATTGATTTAAATGTAAGCGTTCCTTCCAAAACTGAAGCAAAAGCTATTTGCAACAAATGGGAAAAC
AATTCTTCCGATATATATAACAAAATAATTCATGCTCTTATAGAAGATTAA

Upstream 100 bases:

>100_bases
ACTCCTTAATATTTAATATTAATCAAATAACTTTATTATCTTAAAACATATATGGTATAATAGGATTATTATTTCAAAAC
AGTTATGGAGGAAAACATAA

Downstream 100 bases:

>100_bases
TAATCCTGCTATTATTATTAGCAAAAATCGTTATAAAATTTATATAATTTAGGGGGAAAACATAATTGTTTAAAAAACAT
AATTTTCACTTTAATTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLEYKTQDDDKEIIVLTEKGDKV
LFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVGEDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWEN
NSSDIYNKIIHALIED

Sequences:

>Translated_176_residues
MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLEYKTQDDDKEIIVLTEKGDKV
LFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVGEDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWEN
NSSDIYNKIIHALIED
>Mature_176_residues
MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLEYKTQDDDKEIIVLTEKGDKV
LFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVGEDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWEN
NSSDIYNKIIHALIED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20413; Mature: 20413

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLE
CCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEHEEECCCHHHHHHHHHHHHHHHHHHHHH
YKTQDDDKEIIVLTEKGDKVLFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVG
CCCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
EDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWENNSSDIYNKIIHALIED
CCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLE
CCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEHEEECCCHHHHHHHHHHHHHHHHHHHHH
YKTQDDDKEIIVLTEKGDKVLFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVG
CCCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
EDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWENNSSDIYNKIIHALIED
CCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA