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The map label for this gene is dapD

Identifier: 18310891

GI number: 18310891

Start: 2188176

End: 2188886

Strand: Direct

Name: dapD

Synonym: CPE1909

Alternate gene names: 18310891

Gene position: 2188176-2188886 (Clockwise)

Preceding gene: 18310888

Following gene: 18310894

Centisome position: 72.18

GC content: 33.9

Gene sequence:

>711_bases
ATGAGTTATAACTTTACAGATCCATATGAAATTGCTAGATTCATAAAGGAAGTAAAAAAATCAACTCCTGTTAAAGTTTA
TCTTAAAGGTAACTTAGAAGGTGTAGAATTAGGTTCAATAGAATGTTATGGAAATAATGATTTCTATGTATTATTTGGAG
AAAGTGATGAAGTTGCTACTTTCTTAACAGAAAATAAAGATAAAATAGTAAGCTTTAGACTTGAAAATGATAGAAGAAAC
TCAGCTATTCCAATGTTAGACCTTTTAAACATAAACGCTAGAATCGAACCTGGCGCAATAATAAGAGACAGAGTATCAAT
CGGAGATAACGCTGTTATAATGATGGGTGCTGTCATAAACATAGGAGCTGAAATAGGCGAAAGTACAATGGTAGATATGA
ACGCTGTTATAGGTGCTAGAGGAAAACTTGGAAAAAGAGTTCACTTAGGTGCTGGAGCTGTTGTTGCTGGAGTTTTAGAA
CCACCTAGCAAGACTCCATGCATAATAGAAGACGATGTTTTAATAGGAGCTAATGCAGTTATTCTTGAAGGTGTTAAAAT
TGGAAAAGGCTCAGTTGTAGCTGCTGGATCAGTTGTAGTTGAAGATGTACCAGCTGGCGTAGTTGTAGCTGGAACTCCTG
CTAAAATCATTAAATCTGTTGATGAAAAGACTAAAGATAAAACAGAAATATTAGATGATTTAAGAAAATAA

Upstream 100 bases:

>100_bases
TATTGATAATCATTTTTGTTTATAATAATTTATATTGTATGTTATATTTTAATAAATATATAGACAAAATGCATTATAAA
TAGAAAGGATGTAATTTAAT

Downstream 100 bases:

>100_bases
TAAAAAATAGCCATGAGGATTTATTCCCATGGCCTTTTTATTAAAACTTTTAAGAAATTTCTTCACCAGATTCATTTTGT
TCTGATTCAACAGATACTTT

Product: tetrahydrodipicolinate succinylase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSYNFTDPYEIARFIKEVKKSTPVKVYLKGNLEGVELGSIECYGNNDFYVLFGESDEVATFLTENKDKIVSFRLENDRRN
SAIPMLDLLNINARIEPGAIIRDRVSIGDNAVIMMGAVINIGAEIGESTMVDMNAVIGARGKLGKRVHLGAGAVVAGVLE
PPSKTPCIIEDDVLIGANAVILEGVKIGKGSVVAAGSVVVEDVPAGVVVAGTPAKIIKSVDEKTKDKTEILDDLRK

Sequences:

>Translated_236_residues
MSYNFTDPYEIARFIKEVKKSTPVKVYLKGNLEGVELGSIECYGNNDFYVLFGESDEVATFLTENKDKIVSFRLENDRRN
SAIPMLDLLNINARIEPGAIIRDRVSIGDNAVIMMGAVINIGAEIGESTMVDMNAVIGARGKLGKRVHLGAGAVVAGVLE
PPSKTPCIIEDDVLIGANAVILEGVKIGKGSVVAAGSVVVEDVPAGVVVAGTPAKIIKSVDEKTKDKTEILDDLRK
>Mature_235_residues
SYNFTDPYEIARFIKEVKKSTPVKVYLKGNLEGVELGSIECYGNNDFYVLFGESDEVATFLTENKDKIVSFRLENDRRNS
AIPMLDLLNINARIEPGAIIRDRVSIGDNAVIMMGAVINIGAEIGESTMVDMNAVIGARGKLGKRVHLGAGAVVAGVLEP
PSKTPCIIEDDVLIGANAVILEGVKIGKGSVVAAGSVVVEDVPAGVVVAGTPAKIIKSVDEKTKDKTEILDDLRK

Specific function: Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family. DapH subfamily

Homologues:

Organism=Escherichia coli, GI1786362, Length=169, Percent_Identity=38.4615384615385, Blast_Score=86, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6322243, Length=144, Percent_Identity=34.0277777777778, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): DAPH_CLOP1 (Q0TP51)

Other databases:

- EMBL:   CP000246
- RefSeq:   YP_696589.1
- ProteinModelPortal:   Q0TP51
- SMR:   Q0TP51
- STRING:   Q0TP51
- GeneID:   4203595
- GenomeReviews:   CP000246_GR
- KEGG:   cpf:CPF_2165
- TIGR:   CPF_2165
- eggNOG:   COG2171
- HOGENOM:   HBG704071
- OMA:   KNAVIMM
- ProtClustDB:   CLSK883132
- BioCyc:   CPER195103:CPF_2165-MONOMER
- HAMAP:   MF_01691
- InterPro:   IPR013710
- InterPro:   IPR018357
- InterPro:   IPR019873
- InterPro:   IPR011004
- TIGRFAMs:   TIGR03532

Pfam domain/function: PF08503 DapD_N; SSF51161 Trimer_LpxA_like

EC number: =2.3.1.89

Molecular weight: Translated: 25216; Mature: 25085

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYNFTDPYEIARFIKEVKKSTPVKVYLKGNLEGVELGSIECYGNNDFYVLFGESDEVAT
CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEECEEEEECCCCEEEEECCCCCEEE
FLTENKDKIVSFRLENDRRNSAIPMLDLLNINARIEPGAIIRDRVSIGDNAVIMMGAVIN
EEECCCCEEEEEEECCCCCCCCCCEEEEEECCCEECCCCEEEEEECCCCCEEEEEEEHEE
IGAEIGESTMVDMNAVIGARGKLGKRVHLGAGAVVAGVLEPPSKTPCIIEDDVLIGANAV
CCHHCCCCEEEEHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEECCEEECCCEE
ILEGVKIGKGSVVAAGSVVVEDVPAGVVVAGTPAKIIKSVDEKTKDKTEILDDLRK
EEECEEECCCCEEEECEEEEEECCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SYNFTDPYEIARFIKEVKKSTPVKVYLKGNLEGVELGSIECYGNNDFYVLFGESDEVAT
CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEECEEEEECCCCEEEEECCCCCEEE
FLTENKDKIVSFRLENDRRNSAIPMLDLLNINARIEPGAIIRDRVSIGDNAVIMMGAVIN
EEECCCCEEEEEEECCCCCCCCCCEEEEEECCCEECCCCEEEEEECCCCCEEEEEEEHEE
IGAEIGESTMVDMNAVIGARGKLGKRVHLGAGAVVAGVLEPPSKTPCIIEDDVLIGANAV
CCHHCCCCEEEEHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEECCEEECCCEE
ILEGVKIGKGSVVAAGSVVVEDVPAGVVVAGTPAKIIKSVDEKTKDKTEILDDLRK
EEECEEECCCCEEEECEEEEEECCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA