| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310884
Identifier: 18310884
GI number: 18310884
Start: 2182031
End: 2182768
Strand: Reverse
Name: 18310884
Synonym: CPE1902
Alternate gene names: NA
Gene position: 2182768-2182031 (Counterclockwise)
Preceding gene: 18310885
Following gene: 18310883
Centisome position: 72.0
GC content: 26.69
Gene sequence:
>738_bases ATGAAGAGTTATAAGATGATGGCAAAAGTGTATGATGAACTTATATATGAAGATGTAAACTATGGGAACATAGCAGAATA CGCCTTATCAAAATGTGATAAGTATAATATTAATAAAGAAATGTATTTAGATTTAGCCTGTGGAACAGGAAATGTTGGTG TTCATGTAGGAAAATCCTTCAAAGAAAATTATTTTGTTGATCTTTCACAAGATATGCTTATAGAAGCAGATAAAAAGCTT AGAGAAAATAGGGTTAGAGGTAAGATAGTTTACCAAGACATGTGTGAGTTAGAATTAAATAGAAAGTTTGATTTAATAAC ATGTGTTTTAGATTCAACAAATTATATTTTAGATGATGAAAGTGTAGAAAATTATTTAAGAGGGGTATATAATCATTTAA AAGAGGATGGTTTATTTGTATTTGATATAAATTCATACTATAAAATATCAGAAGTATTAGGCAACAATGTTTACACATAT GATAGTGAAGAATTATTTTATGCTTGGGAAAATATTTTTGAAGATGAAATAGTAGAGATGAATTTAAATTTCTTTGTGAA AGATGGAGAAAAGTATGAAAGATTCACAGAGGTTCATGAAGAAAGAGCTTACAAGGAAAGTGAAATAGAATATATTCTTG ATGTAATAGGTTTTAAAATAGTAGAAAAGCATAATGGTTATACAGAAGATGAAGTAACACCAGATACTGAAAGAATAGTT TATATAGTAAAAAAATAA
Upstream 100 bases:
>100_bases CAATGATGAAATATTAGGTAGGAAAAAACCTCACGTTGACGAAAAGTAAAAAAAGTATATAATTTTTAGGTAGAATAATA TATGGGGGATTTAAATTATT
Downstream 100 bases:
>100_bases CGGAGGGATTAAATTATGAGTGATAAATTAATAAGAGCCATAGCTAAAGATGGCATGATAAGAATATTTGCAACAGAAAC TACAGAGTTAGTTGATGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKSYKMMAKVYDELIYEDVNYGNIAEYALSKCDKYNINKEMYLDLACGTGNVGVHVGKSFKENYFVDLSQDMLIEADKKL RENRVRGKIVYQDMCELELNRKFDLITCVLDSTNYILDDESVENYLRGVYNHLKEDGLFVFDINSYYKISEVLGNNVYTY DSEELFYAWENIFEDEIVEMNLNFFVKDGEKYERFTEVHEERAYKESEIEYILDVIGFKIVEKHNGYTEDEVTPDTERIV YIVKK
Sequences:
>Translated_245_residues MKSYKMMAKVYDELIYEDVNYGNIAEYALSKCDKYNINKEMYLDLACGTGNVGVHVGKSFKENYFVDLSQDMLIEADKKL RENRVRGKIVYQDMCELELNRKFDLITCVLDSTNYILDDESVENYLRGVYNHLKEDGLFVFDINSYYKISEVLGNNVYTY DSEELFYAWENIFEDEIVEMNLNFFVKDGEKYERFTEVHEERAYKESEIEYILDVIGFKIVEKHNGYTEDEVTPDTERIV YIVKK >Mature_245_residues MKSYKMMAKVYDELIYEDVNYGNIAEYALSKCDKYNINKEMYLDLACGTGNVGVHVGKSFKENYFVDLSQDMLIEADKKL RENRVRGKIVYQDMCELELNRKFDLITCVLDSTNYILDDESVENYLRGVYNHLKEDGLFVFDINSYYKISEVLGNNVYTY DSEELFYAWENIFEDEIVEMNLNFFVKDGEKYERFTEVHEERAYKESEIEYILDVIGFKIVEKHNGYTEDEVTPDTERIV YIVKK
Specific function: May be a S-adenosyl-L-methionine (SAM)-dependent methyltransferase [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013217 [H]
Pfam domain/function: PF08242 Methyltransf_12 [H]
EC number: NA
Molecular weight: Translated: 29062; Mature: 29062
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYKMMAKVYDELIYEDVNYGNIAEYALSKCDKYNINKEMYLDLACGTGNVGVHVGKSF CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEECCCC KENYFVDLSQDMLIEADKKLRENRVRGKIVYQDMCELELNRKFDLITCVLDSTNYILDDE CCCEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCEEEEEEEECCCCEEECCH SVENYLRGVYNHLKEDGLFVFDINSYYKISEVLGNNVYTYDSEELFYAWENIFEDEIVEM HHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHEEEE NLNFFVKDGEKYERFTEVHEERAYKESEIEYILDVIGFKIVEKHNGYTEDEVTPDTERIV EEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEE YIVKK EEEEC >Mature Secondary Structure MKSYKMMAKVYDELIYEDVNYGNIAEYALSKCDKYNINKEMYLDLACGTGNVGVHVGKSF CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEECCCC KENYFVDLSQDMLIEADKKLRENRVRGKIVYQDMCELELNRKFDLITCVLDSTNYILDDE CCCEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCEEEEEEEECCCCEEECCH SVENYLRGVYNHLKEDGLFVFDINSYYKISEVLGNNVYTYDSEELFYAWENIFEDEIVEM HHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHEEEE NLNFFVKDGEKYERFTEVHEERAYKESEIEYILDVIGFKIVEKHNGYTEDEVTPDTERIV EEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEE YIVKK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA