Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310885

Identifier: 18310885

GI number: 18310885

Start: 2182820

End: 2183092

Strand: Reverse

Name: 18310885

Synonym: CPE1903

Alternate gene names: NA

Gene position: 2183092-2182820 (Counterclockwise)

Preceding gene: 18310889

Following gene: 18310884

Centisome position: 72.02

GC content: 30.77

Gene sequence:

>273_bases
ATGAGCAAGACACCATTAAAAAAAATTATAAAAGGAAAAATAAAATCTAATAAGGAATTAACACCAGCAGAAAAATTAAG
AGAAAAGATGAAATATGAAATAGCTGGGGAATTAGGATTAAGTGATAAGGTTGATAAATTTGGATGGGGAGGATTAACTG
CTGAGGAAACAGGAAGAATTGGTGGGTTAATGACTAAGAGAAAAAAAGAACTTAAATTACCTAGCAATGATGAAATATTA
GGTAGGAAAAAACCTCACGTTGACGAAAAGTAA

Upstream 100 bases:

>100_bases
GGATTTGAGTAAGTTAACTTTCATATTTGACTAAATATGAATATTTAAGCTTATAGGGGGAATAATAGTTTTAAAAATAA
ATTTAAGGTAGGGGAAGAAT

Downstream 100 bases:

>100_bases
AAAAAGTATATAATTTTTAGGTAGAATAATATATGGGGGATTTAAATTATTATGAAGAGTTATAAGATGATGGCAAAAGT
GTATGATGAACTTATATATG

Product: small acid-soluble spore protein beta

Products: NA

Alternate protein names: Small Acid-Soluble Spore Protein Alpha/Beta Type; Small Acid-Soluble Spore Protein Alpha/Beta Family; Small Acid-Soluble Spore Protein Beta; Small Acid-Soluble Spore Protein Alpha/Beta Family Protein

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSKTPLKKIIKGKIKSNKELTPAEKLREKMKYEIAGELGLSDKVDKFGWGGLTAEETGRIGGLMTKRKKELKLPSNDEIL
GRKKPHVDEK

Sequences:

>Translated_90_residues
MSKTPLKKIIKGKIKSNKELTPAEKLREKMKYEIAGELGLSDKVDKFGWGGLTAEETGRIGGLMTKRKKELKLPSNDEIL
GRKKPHVDEK
>Mature_89_residues
SKTPLKKIIKGKIKSNKELTPAEKLREKMKYEIAGELGLSDKVDKFGWGGLTAEETGRIGGLMTKRKKELKLPSNDEILG
RKKPHVDEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10120; Mature: 9989

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS00304 SASP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTPLKKIIKGKIKSNKELTPAEKLREKMKYEIAGELGLSDKVDKFGWGGLTAEETGRI
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCC
GGLMTKRKKELKLPSNDEILGRKKPHVDEK
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKTPLKKIIKGKIKSNKELTPAEKLREKMKYEIAGELGLSDKVDKFGWGGLTAEETGRI
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCC
GGLMTKRKKELKLPSNDEILGRKKPHVDEK
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA