| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is hisK [H]
Identifier: 18310865
GI number: 18310865
Start: 2162901
End: 2163689
Strand: Direct
Name: hisK [H]
Synonym: CPE1883
Alternate gene names: 18310865
Gene position: 2162901-2163689 (Clockwise)
Preceding gene: 18310849
Following gene: 18310878
Centisome position: 71.35
GC content: 27.0
Gene sequence:
>789_bases ATGCTTTATGATTGTCACATACATACAGAATTTTCAGCTGACTCTGAATTAAAAATTAAGGATATATTAGAGAAGGCTAA AAAAAATAATTTAGGAATAATAACTACAGAGCATTTAGATTATAATTTAAAAACTCATCCTCAATTTGCTGAACTTGATA TTGAAGGTTATTTAAAGGAATATAGTAAATATAGAGGAGAAAATATGCAACAAGGTGTAGAACTTGGACTTGCAATGAAC AATGTAGATGAAAACTTTGCCTTTTATGAAAAATACAAAGATAAATTTGATATGATAATAGGTTCTATTCATTCTATAAA TGGTGTTACTCTTTCTAGATTTCTAAAACAAGATACTAGACCTAAAGAAGTTGTTTATGGTGAATATCTTAATAATATGC TTAAATGCATAGAATTTTATGATATTTTTGATACCTTAGGACATATAGATTATCCTTGTAGATACAGTACTTATGATGAT AAGGAAATGACTCTTACGGATTTTAAACCTAAATTCCAATCTATTTTTAAAACACTAATAGATAAAAATAAAGTTCTTGA ACTTAATACTACTCGTTTAGATGATGAAACTTCCTTTAAAAACATGGTAGAAATATATTCATACTATAGAGAACTTGGAG GTAAATATATAACCCTTGGTTCAGATTCTCACAAAATAGAGCATGTAGGTAGAAATTTCGAAAGACTTTATAAATTCTTA GAAGAGACAAAATTAACTCCTTGTTACTTCAAGGACAGAAAATTAATTCCATGTTCATATCCCCTATAA
Upstream 100 bases:
>100_bases TATAATAACTAAATAAATCTTAAAGTAATTTGCTTCCCTTATTATTTTTCTAAGTTATGATAAAATTAAATTATACTAAT ATTTATGCGGAGGTTACAAA
Downstream 100 bases:
>100_bases AAATAATTTTATTTTTTATTAAACCATAAAAAGACTGTAAGAAAATTTATTTTCACATAAATCTCTTACAGTCTCTAAAT ACACTTTTATTTTTTCTTTA
Product: histidinol-phosphatase
Products: NA
Alternate protein names: HolPase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLYDCHIHTEFSADSELKIKDILEKAKKNNLGIITTEHLDYNLKTHPQFAELDIEGYLKEYSKYRGENMQQGVELGLAMN NVDENFAFYEKYKDKFDMIIGSIHSINGVTLSRFLKQDTRPKEVVYGEYLNNMLKCIEFYDIFDTLGHIDYPCRYSTYDD KEMTLTDFKPKFQSIFKTLIDKNKVLELNTTRLDDETSFKNMVEIYSYYRELGGKYITLGSDSHKIEHVGRNFERLYKFL EETKLTPCYFKDRKLIPCSYPL
Sequences:
>Translated_262_residues MLYDCHIHTEFSADSELKIKDILEKAKKNNLGIITTEHLDYNLKTHPQFAELDIEGYLKEYSKYRGENMQQGVELGLAMN NVDENFAFYEKYKDKFDMIIGSIHSINGVTLSRFLKQDTRPKEVVYGEYLNNMLKCIEFYDIFDTLGHIDYPCRYSTYDD KEMTLTDFKPKFQSIFKTLIDKNKVLELNTTRLDDETSFKNMVEIYSYYRELGGKYITLGSDSHKIEHVGRNFERLYKFL EETKLTPCYFKDRKLIPCSYPL >Mature_262_residues MLYDCHIHTEFSADSELKIKDILEKAKKNNLGIITTEHLDYNLKTHPQFAELDIEGYLKEYSKYRGENMQQGVELGLAMN NVDENFAFYEKYKDKFDMIIGSIHSINGVTLSRFLKQDTRPKEVVYGEYLNNMLKCIEFYDIFDTLGHIDYPCRYSTYDD KEMTLTDFKPKFQSIFKTLIDKNKVLELNTTRLDDETSFKNMVEIYSYYRELGGKYITLGSDSHKIEHVGRNFERLYKFL EETKLTPCYFKDRKLIPCSYPL
Specific function: Unknown
COG id: COG1387
COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHP hydrolase family. HisK subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010140 - InterPro: IPR004013 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: =3.1.3.15 [H]
Molecular weight: Translated: 31023; Mature: 31023
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYDCHIHTEFSADSELKIKDILEKAKKNNLGIITTEHLDYNLKTHPQFAELDIEGYLKE CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH YSKYRGENMQQGVELGLAMNNVDENFAFYEKYKDKFDMIIGSIHSINGVTLSRFLKQDTR HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC PKEVVYGEYLNNMLKCIEFYDIFDTLGHIDYPCRYSTYDDKEMTLTDFKPKFQSIFKTLI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH DKNKVLELNTTRLDDETSFKNMVEIYSYYRELGGKYITLGSDSHKIEHVGRNFERLYKFL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCHHHHHHHH EETKLTPCYFKDRKLIPCSYPL HHCCCCCEEECCCEECCCCCCC >Mature Secondary Structure MLYDCHIHTEFSADSELKIKDILEKAKKNNLGIITTEHLDYNLKTHPQFAELDIEGYLKE CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH YSKYRGENMQQGVELGLAMNNVDENFAFYEKYKDKFDMIIGSIHSINGVTLSRFLKQDTR HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC PKEVVYGEYLNNMLKCIEFYDIFDTLGHIDYPCRYSTYDDKEMTLTDFKPKFQSIFKTLI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH DKNKVLELNTTRLDDETSFKNMVEIYSYYRELGGKYITLGSDSHKIEHVGRNFERLYKFL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCHHHHHHHH EETKLTPCYFKDRKLIPCSYPL HHCCCCCEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]