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The map label for this gene is 18310849

Identifier: 18310849

GI number: 18310849

Start: 2138122

End: 2138919

Strand: Direct

Name: 18310849

Synonym: CPE1867

Alternate gene names: NA

Gene position: 2138122-2138919 (Clockwise)

Preceding gene: 18310829

Following gene: 18310865

Centisome position: 70.53

GC content: 29.2

Gene sequence:

>798_bases
ATGATTAAGAAAGTTTTTTCATTATTATTTTCAATAATGATGATTCTATCTATTACTTTAAACACAAAAGTAAGTGCAAA
AGAATTTAATAGCCCTTGTACAAAAGAATTTAACTGGTATTATTCTTTTAATAAAGAGGAAGGTGTTCCTCATGGGCCAA
AAGAAACTCCTTATATAAGCAATCATAAAGTTGTATATTGTGGAGACACATCAAAGAAAGAAATTTTTCTTACTTTTGAT
GAAGGATATGAAAATGGTAATACAGCAAAAATACTTGATATATTAAAAGAAAATCAAGTTCCTGCTGCCTTCTTTGTAAC
AAGACCATATATAAAAGACTATCCAGACCTTATAAAAAGAATGGATGAAGAGGGCCATCTTGTATGTAATCACACTTCTC
ATCATCCATCTATGGCTAAAATACTTGATAAAGAAAAATTTACAAAGGAATTTACTGAAGTTGAAGAGGAATACTCTAAA
GTTACTGGAAAAGAAATGCCTAAATTCTTTAGACCTCCAATGGGTAAATACAGTGAACAATCCTTAGCTTACACTGAAGA
ACTTGGTTATACCTCTGTTTTTTGGAGTTTTGCTTATAAAGATTGGTTAGTTGATGAGCAACCTTCTAAAGAAGCTGCTA
AGAAAAAAATATTAGATAAAGTTCATAATGGCGAAGTAGCTCTGCTTCATGCTGTATCAGATACTAATACTGCTATTTTA
GATGAAATTTTAAAAGAGTTAAAATCTAATGGTTATGAATTTAAATCCTTAAATGATTTAACTCCTAAAAAAGAATAA

Upstream 100 bases:

>100_bases
AATATATATTTCAACAACTGTATTATGTTTCCTAATTATCCACTTAAAAATACAAATTAATCCTAATATATAACACATAC
TAAATTTGAGGTGATATTTT

Downstream 100 bases:

>100_bases
TACTAAATCAATTAAGGGGCCCATATCAAAATAACTTTTATAAAACTTACAAATTGTATGAAGAGAACCTCTAAATTTAG
CTTAATCTATTAATTCTCGA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIKKVFSLLFSIMMILSITLNTKVSAKEFNSPCTKEFNWYYSFNKEEGVPHGPKETPYISNHKVVYCGDTSKKEIFLTFD
EGYENGNTAKILDILKENQVPAAFFVTRPYIKDYPDLIKRMDEEGHLVCNHTSHHPSMAKILDKEKFTKEFTEVEEEYSK
VTGKEMPKFFRPPMGKYSEQSLAYTEELGYTSVFWSFAYKDWLVDEQPSKEAAKKKILDKVHNGEVALLHAVSDTNTAIL
DEILKELKSNGYEFKSLNDLTPKKE

Sequences:

>Translated_265_residues
MIKKVFSLLFSIMMILSITLNTKVSAKEFNSPCTKEFNWYYSFNKEEGVPHGPKETPYISNHKVVYCGDTSKKEIFLTFD
EGYENGNTAKILDILKENQVPAAFFVTRPYIKDYPDLIKRMDEEGHLVCNHTSHHPSMAKILDKEKFTKEFTEVEEEYSK
VTGKEMPKFFRPPMGKYSEQSLAYTEELGYTSVFWSFAYKDWLVDEQPSKEAAKKKILDKVHNGEVALLHAVSDTNTAIL
DEILKELKSNGYEFKSLNDLTPKKE
>Mature_265_residues
MIKKVFSLLFSIMMILSITLNTKVSAKEFNSPCTKEFNWYYSFNKEEGVPHGPKETPYISNHKVVYCGDTSKKEIFLTFD
EGYENGNTAKILDILKENQVPAAFFVTRPYIKDYPDLIKRMDEEGHLVCNHTSHHPSMAKILDKEKFTKEFTEVEEEYSK
VTGKEMPKFFRPPMGKYSEQSLAYTEELGYTSVFWSFAYKDWLVDEQPSKEAAKKKILDKVHNGEVALLHAVSDTNTAIL
DEILKELKSNGYEFKSLNDLTPKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=165, Percent_Identity=32.1212121212121, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323338, Length=154, Percent_Identity=26.6233766233766, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014235 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30619; Mature: 30619

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKVFSLLFSIMMILSITLNTKVSAKEFNSPCTKEFNWYYSFNKEEGVPHGPKETPYIS
CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEC
NHKVVYCGDTSKKEIFLTFDEGYENGNTAKILDILKENQVPAAFFVTRPYIKDYPDLIKR
CCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
MDEEGHLVCNHTSHHPSMAKILDKEKFTKEFTEVEEEYSKVTGKEMPKFFRPPMGKYSEQ
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCH
SLAYTEELGYTSVFWSFAYKDWLVDEQPSKEAAKKKILDKVHNGEVALLHAVSDTNTAIL
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH
DEILKELKSNGYEFKSLNDLTPKKE
HHHHHHHHHCCCEECCCCCCCCCCC
>Mature Secondary Structure
MIKKVFSLLFSIMMILSITLNTKVSAKEFNSPCTKEFNWYYSFNKEEGVPHGPKETPYIS
CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEC
NHKVVYCGDTSKKEIFLTFDEGYENGNTAKILDILKENQVPAAFFVTRPYIKDYPDLIKR
CCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
MDEEGHLVCNHTSHHPSMAKILDKEKFTKEFTEVEEEYSKVTGKEMPKFFRPPMGKYSEQ
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCH
SLAYTEELGYTSVFWSFAYKDWLVDEQPSKEAAKKKILDKVHNGEVALLHAVSDTNTAIL
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH
DEILKELKSNGYEFKSLNDLTPKKE
HHHHHHHHHCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8473853 [H]