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The map label for this gene is 18310853

Identifier: 18310853

GI number: 18310853

Start: 2141781

End: 2142428

Strand: Reverse

Name: 18310853

Synonym: CPE1871

Alternate gene names: NA

Gene position: 2142428-2141781 (Counterclockwise)

Preceding gene: 18310854

Following gene: 18310852

Centisome position: 70.67

GC content: 27.01

Gene sequence:

>648_bases
ATAACTGAAACTCAACTAGAAATTTGTGATAAATGTAAAGCAAATAGAAGTGATTTAGCTCTTCCATATCTTTATTCAGC
AATAGCTTACAATGACATGGGACAATATGATAAAGCTTATGTTGATATAAATGAATATTTAGCTAAGGGTGGAGAAAGAA
ATGAAATAGTTGAGGTTTTATATAATGAGATAAAAGACTCAGCTGATTATGAAGAAGGAAAAGAAGATTTAATAGAAGAA
CCAGAGGATGCTTTAAAAAGACTTCTTCCTTTAGCAGATAAATTCCAAGATAATGCTATTTTAAGATATTATATTGCAAC
AGCTTATAGAAGACTTGGAAATTTTGAAAAGGCAGTTTATTACTTAAATGAATGTTTATCAATTGATGATAGTATAGTTG
AAGCAGTAAATGAAATGGGAATAAATTATGCATCTTTAGGAATATATGATGAAGCTATTAAATATTTAAGAAAAGCCTTT
GAAAGTACAAGAGATATAGAGGTTTGTACTAACTTAATAGTTTGTTATTTAAATGTAGGAAAAATAGAAGAGGCAAAGCA
GCATTTAGATATAGCAAAGGCTATAAACAAGGATGATGAAATAGTAAAAGAAATAGAAACATTTATGAAAAATAATAATA
TTAAATAG

Upstream 100 bases:

>100_bases
TATGCTTTTAAAGGGATTAACTGAAATATCAGATGAAACTGAGGTTTATGAAAATCTTCTTTTAATATTGTCGAATCTTT
AAGAGAAAGAAACCAAGCTT

Downstream 100 bases:

>100_bases
CCTTAGGAGCGGAATATGTATAAGGAGTTATTAGGATATAAAATATTTTCAGATAATAAAGAGGAACTTTTAAAAGAGAT
TGAAAATAAAAAAAGAGTTA

Product: TPR domain protein

Products: NA

Alternate protein names: TPR Domain Protein; TPR-Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTETQLEICDKCKANRSDLALPYLYSAIAYNDMGQYDKAYVDINEYLAKGGERNEIVEVLYNEIKDSADYEEGKEDLIEE
PEDALKRLLPLADKFQDNAILRYYIATAYRRLGNFEKAVYYLNECLSIDDSIVEAVNEMGINYASLGIYDEAIKYLRKAF
ESTRDIEVCTNLIVCYLNVGKIEEAKQHLDIAKAINKDDEIVKEIETFMKNNNIK

Sequences:

>Translated_215_residues
MTETQLEICDKCKANRSDLALPYLYSAIAYNDMGQYDKAYVDINEYLAKGGERNEIVEVLYNEIKDSADYEEGKEDLIEE
PEDALKRLLPLADKFQDNAILRYYIATAYRRLGNFEKAVYYLNECLSIDDSIVEAVNEMGINYASLGIYDEAIKYLRKAF
ESTRDIEVCTNLIVCYLNVGKIEEAKQHLDIAKAINKDDEIVKEIETFMKNNNIK
>Mature_214_residues
TETQLEICDKCKANRSDLALPYLYSAIAYNDMGQYDKAYVDINEYLAKGGERNEIVEVLYNEIKDSADYEEGKEDLIEEP
EDALKRLLPLADKFQDNAILRYYIATAYRRLGNFEKAVYYLNECLSIDDSIVEAVNEMGINYASLGIYDEAIKYLRKAFE
STRDIEVCTNLIVCYLNVGKIEEAKQHLDIAKAINKDDEIVKEIETFMKNNNIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24769; Mature: 24638

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETQLEICDKCKANRSDLALPYLYSAIAYNDMGQYDKAYVDINEYLAKGGERNEIVEVL
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
YNEIKDSADYEEGKEDLIEEPEDALKRLLPLADKFQDNAILRYYIATAYRRLGNFEKAVY
HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
YLNECLSIDDSIVEAVNEMGINYASLGIYDEAIKYLRKAFESTRDIEVCTNLIVCYLNVG
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
KIEEAKQHLDIAKAINKDDEIVKEIETFMKNNNIK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TETQLEICDKCKANRSDLALPYLYSAIAYNDMGQYDKAYVDINEYLAKGGERNEIVEVL
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
YNEIKDSADYEEGKEDLIEEPEDALKRLLPLADKFQDNAILRYYIATAYRRLGNFEKAVY
HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
YLNECLSIDDSIVEAVNEMGINYASLGIYDEAIKYLRKAFESTRDIEVCTNLIVCYLNVG
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
KIEEAKQHLDIAKAINKDDEIVKEIETFMKNNNIK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA