Click here to switch to the map view.

The map label for this gene is 18310854

Identifier: 18310854

GI number: 18310854

Start: 2142447

End: 2142881

Strand: Reverse

Name: 18310854

Synonym: CPE1872

Alternate gene names: NA

Gene position: 2142881-2142447 (Counterclockwise)

Preceding gene: 18310855

Following gene: 18310853

Centisome position: 70.69

GC content: 26.21

Gene sequence:

>435_bases
ATGAGTTTTAATACATTTGCAAAAGAAAAATTATCACAACTTTTATTTTTAGAAATAGATGGAGATGGATTTGTTAAAAG
CTTAGGAAAAGATCCAAAAGAGGTTAATATAAATGAAGTTTATATTCCAATAGATCCAAAACATTTATCACAGGATGTGA
AAAGTGGATATAAATTAGAATCTTTACCAATAAACTATTTAGTTGAAGGAATGTTTTTTGCTTTAGGTGGAGACAAGGAT
TTTAAATTTAATAAGGAGTATAAAAAATTAATTCCACTAATAGAGGATGCTATTCCATGTGTTAAAAAGATAGTAGCTGA
TAAGGTTAAAGAAGAAAATATGGTTGAAGCATTTATGCTTTTAAAGGGATTAACTGAAATATCAGATGAAACTGAGGTTT
ATGAAAATCTTCTTTTAATATTGTCGAATCTTTAA

Upstream 100 bases:

>100_bases
AAAGTTCGAAATTTATGATATATAATAAAATTTAGGTTTATAAATTTTATTTTTAGATAGAATTAAAATAGTTAGTAAAA
GTAGTTAAGGAGATAGATAT

Downstream 100 bases:

>100_bases
GAGAAAGAAACCAAGCTTATAACTGAAACTCAACTAGAAATTTGTGATAAATGTAAAGCAAATAGAAGTGATTTAGCTCT
TCCATATCTTTATTCAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; TPR-Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSFNTFAKEKLSQLLFLEIDGDGFVKSLGKDPKEVNINEVYIPIDPKHLSQDVKSGYKLESLPINYLVEGMFFALGGDKD
FKFNKEYKKLIPLIEDAIPCVKKIVADKVKEENMVEAFMLLKGLTEISDETEVYENLLLILSNL

Sequences:

>Translated_144_residues
MSFNTFAKEKLSQLLFLEIDGDGFVKSLGKDPKEVNINEVYIPIDPKHLSQDVKSGYKLESLPINYLVEGMFFALGGDKD
FKFNKEYKKLIPLIEDAIPCVKKIVADKVKEENMVEAFMLLKGLTEISDETEVYENLLLILSNL
>Mature_143_residues
SFNTFAKEKLSQLLFLEIDGDGFVKSLGKDPKEVNINEVYIPIDPKHLSQDVKSGYKLESLPINYLVEGMFFALGGDKDF
KFNKEYKKLIPLIEDAIPCVKKIVADKVKEENMVEAFMLLKGLTEISDETEVYENLLLILSNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16381; Mature: 16250

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNTFAKEKLSQLLFLEIDGDGFVKSLGKDPKEVNINEVYIPIDPKHLSQDVKSGYKLE
CCCCHHHHHHHHHEEEEEECCCHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEC
SLPINYLVEGMFFALGGDKDFKFNKEYKKLIPLIEDAIPCVKKIVADKVKEENMVEAFML
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKGLTEISDETEVYENLLLILSNL
HHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFNTFAKEKLSQLLFLEIDGDGFVKSLGKDPKEVNINEVYIPIDPKHLSQDVKSGYKLE
CCCHHHHHHHHHEEEEEECCCHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEC
SLPINYLVEGMFFALGGDKDFKFNKEYKKLIPLIEDAIPCVKKIVADKVKEENMVEAFML
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKGLTEISDETEVYENLLLILSNL
HHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA