Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310851

Identifier: 18310851

GI number: 18310851

Start: 2139763

End: 2141049

Strand: Reverse

Name: 18310851

Synonym: CPE1869

Alternate gene names: NA

Gene position: 2141049-2139763 (Counterclockwise)

Preceding gene: 18310852

Following gene: 18310850

Centisome position: 70.63

GC content: 26.42

Gene sequence:

>1287_bases
ATGAAAATTTTATTTATAGCTTGTTATTCTCCTATGATAAATAATTCAGCATCAATTGAAACTCTTATGTACTTAAATAA
TTTATGTAATATAGAGAATAATGATGTGCATCTTTTAACTGTAGACTTTCCTAAAAACTCTATCTACTATGATGAGGAAA
TATTAAAGCTTTTAGATAGTAAAGTAAAGGTTCATGCTATTGAAGGTGGAAAATTATTTAATAAGATTATGCCAAAAAAA
TCTATAGAGGTTAAGGAAGATGAGAAGTCTTCTAACACGAAATCTAGTGGTAAAATTAAGCTTATGAGAAAAATTAAAAA
TAAAATAATTTTTCCTGATATGTATTATAACTGGAGTTTTAAAGCCTCGAATTATGGCATAGAACTTATGAATAAAGAAA
AGTTTGATGTTATATTTTCTATGCATGAGCCACCATCTAGTCACCTTTGTGCTTTAAGAATAAAAAAGCACTTTAAAGAG
ATTCCTTGGGTTTTATATTGGAGCGATCCTTGGCTTAAGGATCCATCAAGAGAGGATATTGGCTTTATAAGAAAATTCAT
AGAAGGTAGACAAGAAAAATCAGTAGTATTAAATGGGGATAGACATATATTTGTAACTGAAGAGAATAAAAAAGATTTTA
TGGAAAAATATAACGTAAAAGAAGATAAAATGTTTATCGTAACCAGGGGATACAATAAAGCCATATATGAAGAAATTGAA
AGGGCAGAAAAGCCAGAACTTTTAAAGGATAATAAGATAAACTTAATTTATGCTGGAGAAATTTTCAGTAAAATTAGGGA
TTTAAGACCTTTTATAAAAGCTTTAAAGGAATTAGAAAAAAGAAATCAGGAGCTATTTAATAGATTAAACATAATATTTT
TTGGAAATATAGATGATGAAAATATTAAAGAAGAATTAAAAAAGTTTTCTAATGTTAGTGTTAATGGAAGAATTGACTAT
AAGGAAGCTTTAAGATATATGATACATGGAGATGTTCTTCTTGTTTTAGGAAACAAAAATTCTAAGCAAATACCTGCTAA
AATATATGATTATTTAGGAACCAAGAATCTTATTATGGTTATATTAGGAGATGAAAATGATCCTATTAAGAATGTTGCAG
CTAATAAAGAAAAGTGTATAGTTAGTGAAAATAATTATGAGGCTATAATAGATGACTTAAATAAATGTAGGGATTTAATA
GATTCAGGTAAGAAATTTAAGGAAAATGAAGAGTATGAATGGAGTAGTATAGGTAAAAAGCTAAATAATATACTAAAATT
AAAATAG

Upstream 100 bases:

>100_bases
AGTGGCTTTATAGAGTAGCTAAAGAGCCTTGGAGAATAAAAAGATTAGGTAGCATACCAAAGTTCTTAGTTTTATCACTT
AAGGAAAGAGGTAAAAGATA

Downstream 100 bases:

>100_bases
GCAATAAGACATGACGGAGGGGTACACAATGAAAAACGAAAAGATTAAAGATTTTATAGAAGATTTAGGTTCAAGTTCAT
CAGCACCTGGTGGTGGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR/Glycosyl Transferase Domain Protein; Group 1 Glycosyl Transferase; TPR/Glycosyl Transferase Domain-Containing Protein; Glycosyl Transferase

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MKILFIACYSPMINNSASIETLMYLNNLCNIENNDVHLLTVDFPKNSIYYDEEILKLLDSKVKVHAIEGGKLFNKIMPKK
SIEVKEDEKSSNTKSSGKIKLMRKIKNKIIFPDMYYNWSFKASNYGIELMNKEKFDVIFSMHEPPSSHLCALRIKKHFKE
IPWVLYWSDPWLKDPSREDIGFIRKFIEGRQEKSVVLNGDRHIFVTEENKKDFMEKYNVKEDKMFIVTRGYNKAIYEEIE
RAEKPELLKDNKINLIYAGEIFSKIRDLRPFIKALKELEKRNQELFNRLNIIFFGNIDDENIKEELKKFSNVSVNGRIDY
KEALRYMIHGDVLLVLGNKNSKQIPAKIYDYLGTKNLIMVILGDENDPIKNVAANKEKCIVSENNYEAIIDDLNKCRDLI
DSGKKFKENEEYEWSSIGKKLNNILKLK

Sequences:

>Translated_428_residues
MKILFIACYSPMINNSASIETLMYLNNLCNIENNDVHLLTVDFPKNSIYYDEEILKLLDSKVKVHAIEGGKLFNKIMPKK
SIEVKEDEKSSNTKSSGKIKLMRKIKNKIIFPDMYYNWSFKASNYGIELMNKEKFDVIFSMHEPPSSHLCALRIKKHFKE
IPWVLYWSDPWLKDPSREDIGFIRKFIEGRQEKSVVLNGDRHIFVTEENKKDFMEKYNVKEDKMFIVTRGYNKAIYEEIE
RAEKPELLKDNKINLIYAGEIFSKIRDLRPFIKALKELEKRNQELFNRLNIIFFGNIDDENIKEELKKFSNVSVNGRIDY
KEALRYMIHGDVLLVLGNKNSKQIPAKIYDYLGTKNLIMVILGDENDPIKNVAANKEKCIVSENNYEAIIDDLNKCRDLI
DSGKKFKENEEYEWSSIGKKLNNILKLK
>Mature_428_residues
MKILFIACYSPMINNSASIETLMYLNNLCNIENNDVHLLTVDFPKNSIYYDEEILKLLDSKVKVHAIEGGKLFNKIMPKK
SIEVKEDEKSSNTKSSGKIKLMRKIKNKIIFPDMYYNWSFKASNYGIELMNKEKFDVIFSMHEPPSSHLCALRIKKHFKE
IPWVLYWSDPWLKDPSREDIGFIRKFIEGRQEKSVVLNGDRHIFVTEENKKDFMEKYNVKEDKMFIVTRGYNKAIYEEIE
RAEKPELLKDNKINLIYAGEIFSKIRDLRPFIKALKELEKRNQELFNRLNIIFFGNIDDENIKEELKKFSNVSVNGRIDY
KEALRYMIHGDVLLVLGNKNSKQIPAKIYDYLGTKNLIMVILGDENDPIKNVAANKEKCIVSENNYEAIIDDLNKCRDLI
DSGKKFKENEEYEWSSIGKKLNNILKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50249; Mature: 50249

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFIACYSPMINNSASIETLMYLNNLCNIENNDVHLLTVDFPKNSIYYDEEILKLLDS
CEEEEEEECCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEECHHHHHHHCC
KVKVHAIEGGKLFNKIMPKKSIEVKEDEKSSNTKSSGKIKLMRKIKNKIIFPDMYYNWSF
CEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEECCEEEEEEEE
KASNYGIELMNKEKFDVIFSMHEPPSSHLCALRIKKHFKEIPWVLYWSDPWLKDPSREDI
EECCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHH
GFIRKFIEGRQEKSVVLNGDRHIFVTEENKKDFMEKYNVKEDKMFIVTRGYNKAIYEEIE
HHHHHHHCCCCCCEEEEECCEEEEEECCCHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
RAEKPELLKDNKINLIYAGEIFSKIRDLRPFIKALKELEKRNQELFNRLNIIFFGNIDDE
HCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCH
NIKEELKKFSNVSVNGRIDYKEALRYMIHGDVLLVLGNKNSKQIPAKIYDYLGTKNLIMV
HHHHHHHHHHCCCCCCEECHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCCEEEE
ILGDENDPIKNVAANKEKCIVSENNYEAIIDDLNKCRDLIDSGKKFKENEEYEWSSIGKK
EECCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LNNILKLK
HHHHCCCC
>Mature Secondary Structure
MKILFIACYSPMINNSASIETLMYLNNLCNIENNDVHLLTVDFPKNSIYYDEEILKLLDS
CEEEEEEECCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEECHHHHHHHCC
KVKVHAIEGGKLFNKIMPKKSIEVKEDEKSSNTKSSGKIKLMRKIKNKIIFPDMYYNWSF
CEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEECCEEEEEEEE
KASNYGIELMNKEKFDVIFSMHEPPSSHLCALRIKKHFKEIPWVLYWSDPWLKDPSREDI
EECCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHH
GFIRKFIEGRQEKSVVLNGDRHIFVTEENKKDFMEKYNVKEDKMFIVTRGYNKAIYEEIE
HHHHHHHCCCCCCEEEEECCEEEEEECCCHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
RAEKPELLKDNKINLIYAGEIFSKIRDLRPFIKALKELEKRNQELFNRLNIIFFGNIDDE
HCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCH
NIKEELKKFSNVSVNGRIDYKEALRYMIHGDVLLVLGNKNSKQIPAKIYDYLGTKNLIMV
HHHHHHHHHHCCCCCCEECHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCCEEEE
ILGDENDPIKNVAANKEKCIVSENNYEAIIDDLNKCRDLIDSGKKFKENEEYEWSSIGKK
EECCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LNNILKLK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA